commit: a5a2b1bc8125c111d11d9474ae10accdbd9fc4c2
Author: Matthias Maier <tamiko <AT> gentoo <DOT> org>
AuthorDate: Tue Aug 30 00:52:46 2016 +0000
Commit: Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
CommitDate: Tue Aug 30 00:52:46 2016 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a5a2b1bc
sci-mathematics/petsc: drop old
Package-Manager: portage-2.2.28
sci-mathematics/petsc/petsc-3.7.2.ebuild | 255 -------------------------------
1 file changed, 255 deletions(-)
diff --git a/sci-mathematics/petsc/petsc-3.7.2.ebuild
b/sci-mathematics/petsc/petsc-3.7.2.ebuild
deleted file mode 100644
index 3ca12ff..0000000
--- a/sci-mathematics/petsc/petsc-3.7.2.ebuild
+++ /dev/null
@@ -1,255 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit eutils flag-o-matic fortran-2 python-any-r1 toolchain-funcs versionator
-
-MY_P="${PN}-$(replace_version_separator _ -)"
-
-DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation"
-HOMEPAGE="http://www.mcs.anl.gov/petsc/";
-SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz";
-
-LICENSE="petsc"
-SLOT="0"
-KEYWORDS="~x86 ~amd64"
-IUSE="afterimage boost complex-scalars cxx debug doc fftw
- fortran hdf5 hypre mpi mumps scotch sparse superlu threads X"
-# Failed: imagemagick metis
-
-# hypre and superlu curretly exclude each other due to missing linking to hypre
-# if both are enabled
-REQUIRED_USE="
- afterimage? ( X )
- hdf5? ( mpi )
- hypre? ( cxx mpi )
- mumps? ( mpi scotch )
- scotch? ( mpi )
- ^^ ( hypre superlu )
-"
-# imagemagick? ( X )
-
-RDEPEND="
- virtual/blas
- virtual/lapack
- afterimage? ( media-libs/libafterimage )
- boost? ( dev-libs/boost )
- fftw? ( sci-libs/fftw:3.0[mpi?] )
- hdf5? ( sci-libs/hdf5[mpi?] )
- hypre? ( >=sci-libs/hypre-2.8.0b[mpi?] )
- mpi? ( virtual/mpi[cxx?,fortran?] )
- mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack )
- scotch? ( sci-libs/scotch[mpi?] )
- sparse? ( sci-libs/suitesparse >=sci-libs/cholmod-1.7.0 )
- superlu? ( sci-libs/superlu )
- X? ( x11-libs/libX11 )
-"
-# metis? ( sci-libs/parmetis )
-# imagemagick? ( media-gfx/imagemagick )
-
-DEPEND="${RDEPEND}
- ${PYTHON_DEPS}
- virtual/pkgconfig
- dev-util/cmake
-"
-# cmake is used for parallel building
-# in some configuration setups, legacy build is used (slow)
-
-#
-# PETSc does not want its Makefiles to be invoked with anything higher than
-# -j1. The underlying build system does automatically invoke a parallel
-# build. This might not be what you want, but *hey* not your choice.
-#
-# V=1 enables verbose output with full compiler and linker invocation
-#
-MAKEOPTS="${MAKEOPTS} -j1 V=1"
-
-S="${WORKDIR}/${MY_P}"
-
-src_prepare() {
- epatch \
- "${FILESDIR}"/${PN}-3.7.0-disable-rpath.patch \
- "${FILESDIR}"/${PN}-3.7.0-fix_sandbox_violation.patch
-
- sed -i -e 's%/usr/bin/env python%/usr/bin/env python2%' configure || die
-}
-
-src_configure() {
- # bug 548498
- # PETSc runs mpi processes during configure that result in a sandbox
- # violation by trying to open /proc/mtrr rw. This is not easy to
- # mitigate because it happens in libpciaccess.so called by libhwloc.so,
- # which is used by libmpi.so.
- addpredict /proc/mtrr
-
- # petsc uses --with-blah=1 and --with-blah=0 to en/disable options
- petsc_enable() {
- use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0"
- }
- # add external library:
- # petsc_with use_flag libname libdir
- # petsc_with use_flag libname include linking_libs
- petsc_with() {
- local myuse p=${2:-${1}}
- if use ${1}; then
- myuse="--with-${p}=1"
- if [[ $# -ge 4 ]]; then
- myuse="${myuse}
--with-${p}-include=${EPREFIX}${3}"
- shift 3
- myuse="${myuse} --with-${p}-lib=$@"
- else
- myuse="${myuse}
--with-${p}-dir=${EPREFIX}${3:-/usr}"
- fi
- else
- myuse="--with-${p}=0"
- fi
- echo ${myuse}
- }
-
- # select between configure options depending on use flag
- petsc_select() {
- use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4"
- }
-
- local mylang
- local myopt
-
- use cxx && mylang="cxx" || mylang="c"
- use debug && myopt="debug" || myopt="opt"
-
- # environmental variables expected by petsc during build
- export PETSC_DIR="${S}"
- export PETSC_ARCH="linux-gnu-${mylang}-${myopt}"
-
- if use debug; then
- strip-flags
- filter-flags -O*
- fi
-
- # C Support on Cxx builds is enabled if possible
- # i.e. when not using complex scalars
- # (no complex type for both available at the same time)
-
- # run petsc configure script
- econf \
- scrollOutput=1 \
- FFLAGS="${FFLAGS} -fPIC" \
- CFLAGS="${CFLAGS} -fPIC" \
- CXXFLAGS="${CXXFLAGS} -fPIC" \
- LDFLAGS="${LDFLAGS}" \
- --with-shared-libraries \
- --with-single-library \
- --with-clanguage=${mylang} \
- $(use cxx && ! use complex-scalars && echo "with-c-support=1") \
- --with-petsc-arch=${PETSC_ARCH} \
- --with-precision=double \
- --with-gnu-compilers \
- --with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs lapack)" \
- $(petsc_enable debug debugging) \
- $(petsc_enable mpi) \
- $(petsc_select mpi cc mpicc $(tc-getCC)) \
- $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \
- $(petsc_enable fortran) \
- $(use fortran && echo "$(petsc_select mpi fc mpif77
$(tc-getF77))") \
- $(petsc_enable mpi mpi-compilers) \
- $(petsc_select complex-scalars scalar-type complex real) \
- --with-windows-graphics=0 \
- --with-matlab=0 \
- --with-cmake=cmake \
- $(petsc_enable threads pthread) \
- $(petsc_with afterimage afterimage \
- /usr/include/libAfterImage -lAfterImage) \
- $(petsc_with hdf5) \
- $(petsc_with hypre hypre \
- /usr/include/hypre -lHYPRE) \
- $(petsc_with sparse suitesparse) \
- $(petsc_with superlu superlu \
- /usr/include/superlu -lsuperlu) \
- $(petsc_with X x) \
- $(petsc_with X x11) \
- $(petsc_with scotch ptscotch \
- /usr/include/scotch \
- [-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \
- $(petsc_with mumps scalapack \
- /usr/include/scalapack -lscalapack) \
- $(petsc_with mumps mumps \
- /usr/include \
-
[-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \
- --with-imagemagick=0 \
- --with-python=0 \
- $(petsc_with boost) \
- $(petsc_with fftw)
-
-# not yet tested:
-# python bindings, netcdf, fftw
-
-# failed dependencies, perhaps fixed in upstream soon:
-# $(petsc_with metis parmetis) \ # needs metis too (>=5.0.2)
-# $(petsc_with imagemagick imagemagick \
-# /usr/include/ImageMagick $($(tc-getPKG_CONFIG) --libs
MagickCore)) \
-# $(petsc_enable threads pthreadclasses) \
-}
-
-src_install() {
- # petsc install structure is very different from
- # installing headers to /usr/include/petsc and lib to /usr/lib
- # it also installs many unneeded executables and scripts
- # so manual install is easier than cleanup after "emake install"
- insinto /usr/include/${PN}
- doins include/*.h*
- insinto /usr/include/${PN}/${PETSC_ARCH}/include
- doins ${PETSC_ARCH}/include/*
- if use fortran; then
- insinto /usr/include/${PN}/finclude
- doins -r include/${PN}/finclude/*
- fi
- if ! use mpi ; then
- insinto /usr/include/${PN}/mpiuni
- doins include/mpiuni/*.h
- fi
- insinto /usr/include/${PN}/conf
- doins lib/${PN}/conf/{variables,rules,test}
- insinto /usr/include/${PN}/${PETSC_ARCH}/conf
- doins ${PETSC_ARCH}/lib/${PN}/conf/{petscrules,petscvariables,RDict.db}
- insinto /usr/include/${PN}/private
- doins include/${PN}/private/*.h
-
- # fix configuration files: replace "${S}" by installed location
- sed -i \
- -e "s:"${S}"::g" \
- "${ED}"/usr/include/${PN}/${PETSC_ARCH}/include/petscconf.h \
- "${ED}"/usr/include/${PN}/${PETSC_ARCH}/conf/petscvariables ||
die
- sed -i \
- -e "s:-I/include:-I${EPREFIX}/usr/include/${PN}:g" \
- -e
"s:-I/linux-gnu-cxx-opt/include:-I${EPREFIX}/usr/include/${PN}/${PETSC_ARCH}/include/:g"
\
- "${ED}"/usr/include/${PN}/${PETSC_ARCH}/conf/petscvariables ||
die
- sed -i \
- -e "s:usr/lib:usr/$(get_libdir):g" \
- "${ED}"/usr/include/${PN}/${PETSC_ARCH}/include/petscconf.h ||
die
-
- # fix the include path of petscvariables in lib/${PN}/conf/variables
- # bug #559172
- sed -i -e 's#lib/petsc/conf/#conf/#g' \
- "${ED}"/usr/include/${PN}/conf/variables || die
-
- # add information about installation directory and
- # PETSC_ARCH to environmental variables
- cat >> 99petsc <<- EOF
- PETSC_ARCH=${PETSC_ARCH}
- PETSC_DIR=${EPREFIX}/usr/include/${PN}
- EOF
- doenvd 99petsc
-
- dolib.so ${PETSC_ARCH}/lib/*.so
- dolib.so ${PETSC_ARCH}/lib/*.so.*
-
- if use doc ; then
- einfo "installing documentation (this could take a while)"
- dodoc docs/manual.pdf
- dohtml -r docs/*.html docs/changes docs/manualpages
- fi
-}
