[gentoo-commits] repo/gentoo:master commit in: sci-biology/tophat/

[David Seifert]

commit:     43ec20457f931039230784be90893ef70f4a2f3c
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Mon Oct  3 20:16:56 2016 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Mon Oct  3 20:21:26 2016 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=43ec2045

sci-biology/tophat: Do not wrap scripts

Package-Manager: portage-2.3.1

 sci-biology/tophat/{tophat-2.1.1-r2.ebuild => tophat-2.1.1-r3.ebuild} | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/sci-biology/tophat/tophat-2.1.1-r2.ebuild 
b/sci-biology/tophat/tophat-2.1.1-r3.ebuild
similarity index 95%
rename from sci-biology/tophat/tophat-2.1.1-r2.ebuild
rename to sci-biology/tophat/tophat-2.1.1-r3.ebuild
index 52a75a6..4d784fa 100644
--- a/sci-biology/tophat/tophat-2.1.1-r2.ebuild
+++ b/sci-biology/tophat/tophat-2.1.1-r3.ebuild
@@ -6,7 +6,7 @@ EAPI=6
 
 PYTHON_COMPAT=( python2_7 )
 
-inherit autotools eutils flag-o-matic python-single-r1 toolchain-funcs
+inherit autotools flag-o-matic python-single-r1 toolchain-funcs
 
 DESCRIPTION="Python-based splice junction mapper for RNA-Seq reads using 
bowtie2"
 HOMEPAGE="https://ccb.jhu.edu/software/tophat/";
@@ -70,7 +70,7 @@ src_install() {
        local i
        # install scripts properly
        for i in bed_to_juncs contig_to_chr_coords sra_to_solid tophat 
tophat-fusion-post; do
-               python_doscript "${ED%/}/usr/bin/${i}"
+               python_fix_shebang "${ED%/}/usr/bin/${i}"
        done
 
        # install python modules properly