commit: 5086e10641adfda004c4906e47c660e4237dcc34 Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org> AuthorDate: Thu Jan 5 04:52:53 2017 +0000 Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org> CommitDate: Sat Jan 7 01:00:55 2017 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5086e106
sci-mathematics/pymc3: initial import Package-Manager: Portage-2.3.3, Repoman-2.3.1 sci-mathematics/pymc3/Manifest | 1 + sci-mathematics/pymc3/metadata.xml | 18 +++++++++ sci-mathematics/pymc3/pymc3-3.0_rc6.ebuild | 60 ++++++++++++++++++++++++++++++ 3 files changed, 79 insertions(+) diff --git a/sci-mathematics/pymc3/Manifest b/sci-mathematics/pymc3/Manifest new file mode 100644 index 00000000..4d99be0 --- /dev/null +++ b/sci-mathematics/pymc3/Manifest @@ -0,0 +1 @@ +DIST pymc3-3.0rc6.tar.gz 992525 SHA256 8df5a190218d3eea2655915847aad9c87ae9719cc507c5c3e24ec4973408051d SHA512 54534e07f61dbf1b499a2d9e249512d1475074bcf67612b36ab3b72456945eb6af4a450d6739195891f0d398612304861c23fe4a222304e1609240ba348f1792 WHIRLPOOL 251d85ac949569000d5b188a40645548389dbed8fd47f9f21ee6c6569805b3f5350185f6f0247022fd08e46fd4f41f137167b9eba3814e43afb88a09623d95f3 diff --git a/sci-mathematics/pymc3/metadata.xml b/sci-mathematics/pymc3/metadata.xml new file mode 100644 index 00000000..d212131 --- /dev/null +++ b/sci-mathematics/pymc3/metadata.xml @@ -0,0 +1,18 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="project"> + <email>[email protected]</email> + <name>Gentoo Mathematics Project</name> + </maintainer> + <longdescription lang="en"> + PyMC3 is a Python package for Bayesian statistical modeling and + Probabilistic Machine Learning which focuses on advanced Markov + chain Monte Carlo and variational fitting algorithms. Its + flexibility and extensibility make it applicable to a large suite + of problems. + </longdescription> + <upstream> + <remote-id type="github">pymc-devs/pymc3</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-mathematics/pymc3/pymc3-3.0_rc6.ebuild b/sci-mathematics/pymc3/pymc3-3.0_rc6.ebuild new file mode 100644 index 00000000..ea20888 --- /dev/null +++ b/sci-mathematics/pymc3/pymc3-3.0_rc6.ebuild @@ -0,0 +1,60 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +PYTHON_COMPAT=( python{2_7,3_4,3_5} ) + +inherit distutils-r1 virtualx xdg-utils + +MYP=${P/_} +S="${WORKDIR}/${MYP}" + +DESCRIPTION="Bayesian Modeling and Probabilistic Machine Learning in Python" +HOMEPAGE="http://pymc-devs.github.io/pymc3/"; +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${MYP}.tar.gz" + +SLOT=0 +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +LICENSE="AFL-3.0" + +IUSE="test" + +RDEPEND=" + <=dev-python/CommonMark-0.5.4[${PYTHON_USEDEP}] + >=dev-python/joblib-0.9[${PYTHON_USEDEP}] + >=dev-python/numpy-1.11[${PYTHON_USEDEP},lapack] + >=dev-python/matplotlib-1.5[${PYTHON_USEDEP}] + dev-python/nbsphinx[${PYTHON_USEDEP}] + dev-python/numpydoc[${PYTHON_USEDEP}] + >=dev-python/pandas-0.18[${PYTHON_USEDEP}] + >=dev-python/patsy-0.4[${PYTHON_USEDEP}] + >=dev-python/recommonmark-0.4[${PYTHON_USEDEP}] + dev-python/sphinx[${PYTHON_USEDEP}] + >=dev-python/theano-0.8.2[${PYTHON_USEDEP}] + >=dev-python/tqdm-4.8.4[${PYTHON_USEDEP}] + >=sci-libs/scipy-0.12[${PYTHON_USEDEP}] + virtual/python-enum34[${PYTHON_USEDEP}] +" +DEPEND=" + dev-python/setuptools[${PYTHON_USEDEP}] + dev-python/cython[${PYTHON_USEDEP}] + test? ( + ${RDEPEND} + dev-python/nose[${PYTHON_USEDEP}] + ) +" + +DOCS=(CHANGELOG.md CONTRIBUTING.md RELEASE-NOTES.md + CONDUCT.md GOVERNANCE.md README.rst) + +python_prepare_all() { + xdg_environment_reset + distutils-r1_python_prepare_all +} + +python_test() { + echo 'backend: agg' > matplotlibrc || die + virtx esetup.py test +}
