commit: 49c918e8544ecb0141046aef3b71795b46dd1fcd Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Tue Jan 10 01:05:02 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Tue Jan 10 01:05:02 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=49c918e8
sci-biology/vcflib: disctinguish various openmp commandline switches Package-Manager: Portage-2.3.3, Repoman-2.3.1 sci-biology/vcflib/vcflib-9999.ebuild | 19 +++++++++++++++---- 1 file changed, 15 insertions(+), 4 deletions(-) diff --git a/sci-biology/vcflib/vcflib-9999.ebuild b/sci-biology/vcflib/vcflib-9999.ebuild index 5a03fe4..d66d935 100644 --- a/sci-biology/vcflib/vcflib-9999.ebuild +++ b/sci-biology/vcflib/vcflib-9999.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2016 Gentoo Foundation +# Copyright 1999-2017 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ @@ -15,9 +15,9 @@ EGIT_REPO_URI="https://github.com/vcflib/vcflib.git"; LICENSE="MIT-with-advertising" SLOT="0" KEYWORDS="" -IUSE="mpi" +IUSE="openmp" -DEPEND="mpi? ( sys-cluster/openmpi )" +DEPEND="" RDEPEND="${DEPEND}" # contains bundled sci-biology/htslib ? # see also ./include for possible traces of other bundled sw @@ -26,10 +26,21 @@ src_prepare(){ default sed -e "s/^CXX = g++/CXX = $(tc-getCXX)/" -i Makefile || die sed -e "s/^CXXFLAGS = -O3/CXXFLAGS = ${CXXFLAGS}/" -i Makefile || die + # openmp detection stolen from velvet-1.2.10.ebuild + if use openmp; then + if [[ $(tc-getCXX) =~ g++ ]]; then + local eopenmp=-fopenmp + elif [[ $(tc-getCXX) =~ cxx ]]; then + local eopenmp=-openmp + sed -e "s/-fopenmp/${eopenmp}/" -i Makefile || die + else + elog "Cannot detect compiler type so not setting openmp support" + fi + fi } src_compile(){ - if use mpi ; then + if use openmp ; then emake openmp else emake
