commit: f261f34b716be67fe47b1c5c31f1743fbdc9048e Author: David Seifert <soap <AT> gentoo <DOT> org> AuthorDate: Sat Feb 25 20:30:10 2017 +0000 Commit: David Seifert <soap <AT> gentoo <DOT> org> CommitDate: Sat Feb 25 20:35:14 2017 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f261f34b
sci-biology/sim4: Modernise to EAPI 6 Package-Manager: Portage-2.3.3, Repoman-2.3.1 .../files/sim4-20030921-fix-build-system.patch | 21 ++++++++++++++++ sci-biology/sim4/sim4-20030921-r2.ebuild | 29 ++++++++++++++++++++++ 2 files changed, 50 insertions(+) diff --git a/sci-biology/sim4/files/sim4-20030921-fix-build-system.patch b/sci-biology/sim4/files/sim4-20030921-fix-build-system.patch new file mode 100644 index 0000000000..8fd50fe9cf --- /dev/null +++ b/sci-biology/sim4/files/sim4-20030921-fix-build-system.patch @@ -0,0 +1,21 @@ +Fix build system to honour user flags. + +--- a/Makefile ++++ b/Makefile +@@ -1,13 +1,11 @@ +- + # For better performance, replace ``-O'' with whatever + # the best optimization flag is for your computer. + # For Sun's compilers under Solaris, ``-fast'' works well. + # For gcc, ``-O2'' works well. +-CC=cc +-CFLAGS=-O +-LDLIBS=-lm ++CC ?= gcc ++LDLIBS = -lm + + sim4: +- $(CC) -o sim4 -I. $(CFLAGS) *.c $(LDLIBS) ++ $(CC) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) -o sim4 -I. *.c $(LDLIBS) + clean: + rm -f sim4 *.o diff --git a/sci-biology/sim4/sim4-20030921-r2.ebuild b/sci-biology/sim4/sim4-20030921-r2.ebuild new file mode 100644 index 0000000000..dcfe354d05 --- /dev/null +++ b/sci-biology/sim4/sim4-20030921-r2.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +inherit toolchain-funcs + +DESCRIPTION="A program to align cDNA and genomic DNA" +HOMEPAGE="http://globin.cse.psu.edu/html/docs/sim4.html"; +SRC_URI="http://globin.cse.psu.edu/ftp/dist/sim4/sim4.tar.gz"; + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86" +IUSE="" + +S=${WORKDIR}/${PN}.2003-09-21 + +PATCHES=( "${FILESDIR}"/${PN}-20030921-fix-build-system.patch ) + +src_configure() { + tc-export CC +} + +src_install() { + dobin ${PN} + einstalldocs +}
