commit: a1b3056e6cae31c803fd4cd3a77adbd5a9cd4937
Author: David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sun Feb 11 12:20:51 2018 +0000
Commit: David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sun Feb 11 12:20:51 2018 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a1b3056e
sci-biology/seqan: Add live ebuild
Package-Manager: Portage-2.3.24, Repoman-2.3.6
sci-biology/seqan/seqan-9999.ebuild | 90 +++++++++++++++++++++++++++++++++++++
1 file changed, 90 insertions(+)
diff --git a/sci-biology/seqan/seqan-9999.ebuild
b/sci-biology/seqan/seqan-9999.ebuild
new file mode 100644
index 00000000000..0005819ff4d
--- /dev/null
+++ b/sci-biology/seqan/seqan-9999.ebuild
@@ -0,0 +1,90 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+: ${CMAKE_MAKEFILE_GENERATOR:=ninja}
+PYTHON_COMPAT=( python2_7 )
+
+inherit cmake-utils multibuild python-any-r1 toolchain-funcs
+
+DESCRIPTION="C++ Sequence Analysis Library"
+HOMEPAGE="http://www.seqan.de/";
+
+if [[ ${PV} == *9999 ]]; then
+ inherit git-r3
+ EGIT_REPO_URI="https://github.com/seqan/seqan.git";
+ EGIT_BRANCH="develop"
+else
+ SRC_URI="https://github.com/seqan/seqan/archive/seqan-v${PV}.tar.gz";
+ KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+
+ S=${WORKDIR}/seqan-seqan-v${PV}
+fi
+
+LICENSE="BSD GPL-3"
+SLOT="0"
+IUSE="cpu_flags_x86_sse4_1 doc tools"
+REQUIRED_USE="cpu_flags_x86_sse4_1"
+
+RDEPEND="
+ app-arch/bzip2:=
+ sys-libs/zlib:=
+ !!sci-biology/seqan:2.0
+ !!sci-biology/seqan:2.1
+ !!sci-biology/seqan:2.2"
+DEPEND="
+ ${RDEPEND}
+ doc? (
+ $(python_gen_any_dep 'dev-python/sphinx[${PYTHON_USEDEP}]')
+ ${PYTHON_DEPS}
+ )"
+
+python_check_deps() {
+ use doc && has_version "dev-python/sphinx[${PYTHON_USEDEP}]"
+}
+
+pkg_setup() {
+ if [[ ${MERGE_TYPE} != binary ]]; then
+ use doc && python-any-r1_pkg_setup
+ use tools && tc-check-openmp
+
+ MULTIBUILD_VARIANTS=(
+ $(usev tools)
+ library
+ )
+ fi
+}
+
+src_configure() {
+ my_configure() {
+ local mycmakeargs=( -DCMAKE_INSTALL_DOCDIR="share/doc/${PF}" )
+ case "${MULTIBUILD_ID}" in
+ tools)
+ mycmakeargs+=(
+ -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_APPS
+ -DSEQAN_NO_DOX=ON
+ )
+ ;;
+ library)
+ mycmakeargs+=(
+
-DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_LIBRARY
+ -DSEQAN_NO_DOX=$(usex !doc)
+ )
+ ;;
+ *)
+ die "${MULTIBUILD_ID} is not recognized"
+ ;;
+ esac
+ cmake-utils_src_configure
+ }
+ multibuild_foreach_variant my_configure
+}
+
+src_compile() {
+ multibuild_foreach_variant cmake-utils_src_compile
+}
+
+src_install() {
+ multibuild_foreach_variant cmake-utils_src_install
+}
