commit: d864323a41d729169523202a2d3bd1dd9c2e308f Author: Mikle Kolyada <zlogene <AT> gentoo <DOT> org> AuthorDate: Sat Jun 2 07:12:37 2018 +0000 Commit: Mikle Kolyada <zlogene <AT> gentoo <DOT> org> CommitDate: Sat Jun 2 07:12:37 2018 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=d864323a
sci-chemistry/cyana: remove last rited package sci-chemistry/cyana/Manifest | 1 - sci-chemistry/cyana/cyana-2.1.ebuild | 71 --------------------------- sci-chemistry/cyana/files/2.1-exec.patch | 77 ------------------------------ sci-chemistry/cyana/files/2.1-expire.patch | 15 ------ sci-chemistry/cyana/files/2.1-typo.patch | 13 ----- sci-chemistry/cyana/files/2.1-xiar.patch | 16 ------- sci-chemistry/cyana/metadata.xml | 8 ---- 7 files changed, 201 deletions(-) diff --git a/sci-chemistry/cyana/Manifest b/sci-chemistry/cyana/Manifest deleted file mode 100644 index c5e41a5130a..00000000000 --- a/sci-chemistry/cyana/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST cyana-2.1.tar.gz 2203650 BLAKE2B 0af9049b24674a43cfea44129c57a1dbf7c5b457f2f02272d89f60b21a7c6571884d36575cdb6f98b84a1490c318f6bb6b41fe66e417cd0bb371895479d9d372 SHA512 20f5369e47198000927ee9a60beda34d265fddcd6be59f0d5d81ac23691b7e870ca674bdd7215a13bc849586411a007ebb1ff46072b55f255a6d796359067be8 diff --git a/sci-chemistry/cyana/cyana-2.1.ebuild b/sci-chemistry/cyana/cyana-2.1.ebuild deleted file mode 100644 index f017c9af247..00000000000 --- a/sci-chemistry/cyana/cyana-2.1.ebuild +++ /dev/null @@ -1,71 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit eutils fortran-2 toolchain-funcs - -DESCRIPTION="Combined assignment and dynamics algorithm for NMR applications" -HOMEPAGE="http://www.las.jp/english/products/cyana.html"; -SRC_URI="${P}.tar.gz" - -LICENSE="CYANA" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -RESTRICT="fetch" - -# we need libg2c for gfortran # 136988 -DEPEND="dev-lang/ifc" -RDEPEND="${DEPEND}" - -pkg_nofetch() { - elog "Please visit" - elog "http://www.las.jp/english/products/cyana.html"; - elog "and get a copy of ${A}." - elog "Place it in ${DISTDIR}." -} - -src_prepare() { - epatch \ - "${FILESDIR}"/${PV}-typo.patch \ - "${FILESDIR}"/${PV}-exec.patch \ - "${FILESDIR}"/${PV}-expire.patch \ - "${FILESDIR}"/${PV}-xiar.patch - - cat >> etc/config <<- EOF - VERSION=${PV} - SHELL=${EPREFIX}/bin/sh - FC=ifort - FFLAGS=${FFLAGS} -openmp -threads - FFLAGS2=${FFLAGS} -openmp -threads - CC=$(tc-getCC) - AR=xiar - RANLIB=ranlib - FORK=g77fork.o - LDFLAGS=${LDFLAGS} -reentrancy threaded -openmp - LIBS= - DEFS=-Dintel - SYSTEM=intel - EOF -} - -src_compile() { - cd src || die - emake -} - -src_install() { - dobin cyana{job,table,filter,clean} - newbin src/${PN}/${PN}exe.* ${PN} - insinto /usr/share/${PN} - doins -r lib macro help - use examples && doins -r demo - - cat >> "${T}"/20cyana <<- EOF - CYANALIB="${EPREFIX}/usr/share/${PN}" - EOF - - doenvd "${T}"/20cyana -} diff --git a/sci-chemistry/cyana/files/2.1-exec.patch b/sci-chemistry/cyana/files/2.1-exec.patch deleted file mode 100644 index 28cd88d3eee..00000000000 --- a/sci-chemistry/cyana/files/2.1-exec.patch +++ /dev/null @@ -1,77 +0,0 @@ -diff --git a/cyana b/cyana -index 4f746cf..a7ff060 100755 ---- a/cyana -+++ b/cyana -@@ -45,16 +45,13 @@ shift `expr $optind - 1` - - if [ "$h" ]; then usage=1; fi - if [ "$usage" ]; then -- echo "Usage: $prog -hctx parameters ..." -+ echo "Usage: $prog -hS parameters ..." - echo - echo " -h help" - echo " -c command command to start program (must contain \$exefile)" - echo " -S run in safe mode, i.e. within one directory" -- echo " -t system explicit system type" -- echo " -x display name of executable without executing it" - exit 2 - fi --if [ "$c" ]; then cmd="$c"; fi - sys=$t - mode=$x - safe=$S -@@ -65,23 +62,6 @@ safe=$S - eval ${PROG}ARG='$*' - export ${PROG}ARG - -- --# ------ Set library name ------ -- --f=$0 --if [ `echo $f | sed 's,^/.*,+,'` != "+" ]; then f=`which $0`; fi --odir=`pwd` --while [ "`ls -l $f | awk '{ print substr($1,1,1) }'`" = "l" ]; do -- l=`ls -l $f | awk '{ i = NF; print $i }'` -- cd `dirname $f`; cd `dirname $l`; l=`pwd`/`basename $l` -- f=$l --done --cd `dirname $f` --libdir=`pwd | sed 's,/src/'${prog}'$,,'` --cd $odir --eval ${PROG}LIB=$libdir --export ${PROG}LIB -- - if [ "$safe" ]; then - CYANAINIT=initsafe; export CYANAINIT - fi -@@ -89,29 +69,4 @@ fi - - # ------ Start the program ------ - --if [ -d $libdir/src/$prog ]; then -- exe=$libdir/src/$prog/$exe --else -- exe=$libdir/$exe --fi --if [ "$sys" = "" ]; then -- sys=`$libdir/etc/identify` -- files="$exe.$sys* $exe.gnu $exe.*" --else -- files=$exe.$sys --fi --for exefile in $files; do -- if [ -x $exefile ]; then -- if [ "$mode" ]; then -- echo $exefile; exit 0 -- else -- if [ "`echo $cmd | grep -c '\$exefile'`" -gt 0 ]; then -- eval exec $cmd -- else -- eval exec $cmd $exefile -- fi -- fi -- fi --done --echo "No executable found in \"`dirname $exe`\"." --exit 1 -+exec cyana diff --git a/sci-chemistry/cyana/files/2.1-expire.patch b/sci-chemistry/cyana/files/2.1-expire.patch deleted file mode 100644 index e18008286f6..00000000000 --- a/sci-chemistry/cyana/files/2.1-expire.patch +++ /dev/null @@ -1,15 +0,0 @@ ---- src/inclan/unix.for.orig 2011-01-05 14:56:46.572193759 +0100 -+++ src/inclan/unix.for 2011-01-05 14:57:27.833627375 +0100 -@@ -206,11 +206,8 @@ - end if - if (iwbeg.lt.0) then - iwbeg=igttim -- iexpir=(julday(12,31,2010)-julday(1,1,1970))*24*3600 -- if (iwbeg.gt.iexpir) call fatmsg ('License expired.') -+ iexpir=iwbeg+100 - j=(iexpir-iwbeg)/(24*3600) -- if (j.lt.1000) -- * call wrnmsg ('License expires in '//plural(j,'day')//'.') - end if - iwall=igttim-iwbeg - c print *,'iwall = ',iwall,iwbeg,idat,itim \ No newline at end of file diff --git a/sci-chemistry/cyana/files/2.1-typo.patch b/sci-chemistry/cyana/files/2.1-typo.patch deleted file mode 100644 index 3f011a9b2c2..00000000000 --- a/sci-chemistry/cyana/files/2.1-typo.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/src/cyana/putpro.f b/src/cyana/putpro.f -index d4080f9..4490225 100644 ---- a/src/cyana/putpro.f -+++ b/src/cyana/putpro.f -@@ -66,7 +66,7 @@ c ------------------------------------------------------ BMRB header - * ' _Mol_residue_sequence', - * ';' - do i=1,nr,20 -- write (iunit,'(20A1))') (rcode(rnam(j)),j=i,min(nr,i+19)) -+ write (iunit,'(20A1)') (rcode(rnam(j)),j=i,min(nr,i+19)) - end do - - write (iunit,'(A)') diff --git a/sci-chemistry/cyana/files/2.1-xiar.patch b/sci-chemistry/cyana/files/2.1-xiar.patch deleted file mode 100644 index e8393253d7f..00000000000 --- a/sci-chemistry/cyana/files/2.1-xiar.patch +++ /dev/null @@ -1,16 +0,0 @@ - src/inclan/Makefile | 2 +- - 1 files changed, 1 insertions(+), 1 deletions(-) - -diff --git a/src/inclan/Makefile b/src/inclan/Makefile -index fc5a8bf..482d48f 100644 ---- a/src/inclan/Makefile -+++ b/src/inclan/Makefile -@@ -35,7 +35,7 @@ clean: - - inclan.a: $(OBJS) - rm -f $@ -- ar rc $@ $(OBJS) -+ $(AR) rc $@ $(OBJS) - if [ "$(RANLIB)" ]; then $(RANLIB) $@; fi - - inclan.o: inclan.for diff --git a/sci-chemistry/cyana/metadata.xml b/sci-chemistry/cyana/metadata.xml deleted file mode 100644 index 8937bad0b17..00000000000 --- a/sci-chemistry/cyana/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Chemistry Project</name> - </maintainer> -</pkgmetadata>
