commit: ef5ecf680ba73c80128032ab031589188d49bc50
Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
AuthorDate: Thu Mar 7 16:00:08 2019 +0000
Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org>
CommitDate: Thu Mar 7 16:00:26 2019 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ef5ecf68
sci-chemistry/gmxapi: New package
Package-Manager: Portage-2.3.62, Repoman-2.3.12
Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org>
sci-chemistry/gmxapi/Manifest | 1 +
sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild | 60 ++++++++++++++++++++++++++++++
sci-chemistry/gmxapi/metadata.xml | 12 ++++++
3 files changed, 73 insertions(+)
diff --git a/sci-chemistry/gmxapi/Manifest b/sci-chemistry/gmxapi/Manifest
new file mode 100644
index 00000000000..7057d007aed
--- /dev/null
+++ b/sci-chemistry/gmxapi/Manifest
@@ -0,0 +1 @@
+DIST gmxapi-0.0.7.1.tar.gz 671400 BLAKE2B
5db024bceaed262fc1bd2ef35c0c24a31eff12abde7766ba0eea9d5aabe04c435cdf3c79c04d7932f2110de837a0d06e1f66239f22ba6f313410ed8c9d899788
SHA512
4103d67be3c869907613ec74fc46f14b15242ad93a973fc984dbb25e79bb0bb697d9d2ad9b67a8da2500e5a89b8f78ea1ef1632455af29830e11c2bf1f11bc44
diff --git a/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
new file mode 100644
index 00000000000..babdf402976
--- /dev/null
+++ b/sci-chemistry/gmxapi/gmxapi-0.0.7.1.ebuild
@@ -0,0 +1,60 @@
+# Copyright 2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+MAKE_MAKEFILE_GENERATOR="ninja"
+
+PYTHON_COMPAT=( python2_7 python3_{4,5,6} )
+
+inherit cmake-utils python-r1
+
+DESCRIPTION="Gromacs API bindings"
+HOMEPAGE="https://github.com/kassonlab/gmxapi";
+SRC_URI="https://github.com/kassonlab/gmxapi/archive/v${PV}.tar.gz ->
${P}.tar.gz"
+
+LICENSE="LGPL-2.1"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+DEPEND="
+ ${PYTHON_DEPS}
+ >=sci-chemistry/gromacs-2019:="
+RDEPEND="
+ ${DEPEND}
+ sci-libs/scikits[${PYTHON_USEDEP}]
+ dev-python/networkx[${PYTHON_USEDEP}]
+"
+BDEPEND=""
+
+src_configure() {
+ my_impl_src_configure() {
+ local mycmakeargs=(
+ -DCMAKE_STRIP="${EPREFIX}/bin/true"
+ -DCMAKE_INSTALL_PREFIX="${ED%/}/usr"
+ -DPYTHON_EXECUTABLE="${EPREFIX}/usr/bin/${EPYTHON}"
+
-DGMXAPI_INSTALL_PATH="${EPREFIX}/usr/$(get_libdir)/${EPYTHON}/site-packages/gmx"
+ )
+
+ cmake-utils_src_configure
+ }
+
+ python_foreach_impl my_impl_src_configure
+}
+
+src_compile() {
+ python_foreach_impl cmake-utils_src_make
+}
+
+src_install() {
+ my_impl_src_install() {
+ cd "${BUILD_DIR}" || die
+ cmake-utils_src_install
+ python_optimize
+ }
+
+ python_foreach_impl my_impl_src_install
+}
diff --git a/sci-chemistry/gmxapi/metadata.xml
b/sci-chemistry/gmxapi/metadata.xml
new file mode 100644
index 00000000000..7daa2ce7e5f
--- /dev/null
+++ b/sci-chemistry/gmxapi/metadata.xml
@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
+<pkgmetadata>
+ <maintainer type="person">
+ <email>[email protected]</email>
+ <name>Alexey Shvetsov</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>[email protected]</email>
+ <name>Gentoo Chemistry Project</name>
+ </maintainer>
+</pkgmetadata>
