commit:     6d3f8d736bf1a9653f516c3e959a97948c61f843
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Mon Mar 25 11:08:21 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Mon Mar 25 11:08:21 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=6d3f8d73

dev-java/htsjdk: 2.3.0 which was the last using Apache ant

Bump to EAPI7

Building does not work since sandbox has now no network access.

Downloading https://services.gradle.org/distributions/gradle-5.2.1-bin.zip

Exception in thread "main" java.net.SocketException: Network
is unreachable (connect failed)

htsjdk calls some `gradlew` wrapper so the recent ebuilds
need more work to use dev-java/gradle-bin package.

Package-Manager: Portage-2.3.62, Repoman-2.3.12
Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>

 dev-java/htsjdk/htsjdk-2.1.0.ebuild                           | 4 ++--
 dev-java/htsjdk/{htsjdk-2.5.1.ebuild => htsjdk-2.19.0.ebuild} | 7 ++++---
 dev-java/htsjdk/{htsjdk-2.2.2.ebuild => htsjdk-2.3.0.ebuild}  | 4 ++--
 dev-java/htsjdk/htsjdk-9999.ebuild                            | 7 ++++---
 4 files changed, 12 insertions(+), 10 deletions(-)

diff --git a/dev-java/htsjdk/htsjdk-2.1.0.ebuild 
b/dev-java/htsjdk/htsjdk-2.1.0.ebuild
index fc2dd6e8a..c94f79781 100644
--- a/dev-java/htsjdk/htsjdk-2.1.0.ebuild
+++ b/dev-java/htsjdk/htsjdk-2.1.0.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 JAVA_PKG_IUSE="doc source"
 

diff --git a/dev-java/htsjdk/htsjdk-2.5.1.ebuild 
b/dev-java/htsjdk/htsjdk-2.19.0.ebuild
similarity index 91%
rename from dev-java/htsjdk/htsjdk-2.5.1.ebuild
rename to dev-java/htsjdk/htsjdk-2.19.0.ebuild
index 755a6fa1f..349e56673 100644
--- a/dev-java/htsjdk/htsjdk-2.5.1.ebuild
+++ b/dev-java/htsjdk/htsjdk-2.19.0.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 JAVA_PKG_IUSE="doc source"
 
@@ -18,7 +18,8 @@ KEYWORDS=""
 
 CDEPEND="dev-java/commons-jexl:2
        dev-java/commons-compress:0
-       dev-java/commons-logging:0"
+       dev-java/commons-logging:0
+       dev-java/gradle-bin:*"
 
 DEPEND=">=virtual/jdk-1.8
        ${CDEPEND}"

diff --git a/dev-java/htsjdk/htsjdk-2.2.2.ebuild 
b/dev-java/htsjdk/htsjdk-2.3.0.ebuild
similarity index 95%
rename from dev-java/htsjdk/htsjdk-2.2.2.ebuild
rename to dev-java/htsjdk/htsjdk-2.3.0.ebuild
index fc2dd6e8a..c94f79781 100644
--- a/dev-java/htsjdk/htsjdk-2.2.2.ebuild
+++ b/dev-java/htsjdk/htsjdk-2.3.0.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 JAVA_PKG_IUSE="doc source"
 

diff --git a/dev-java/htsjdk/htsjdk-9999.ebuild 
b/dev-java/htsjdk/htsjdk-9999.ebuild
index b4a3c1441..2123bbc55 100644
--- a/dev-java/htsjdk/htsjdk-9999.ebuild
+++ b/dev-java/htsjdk/htsjdk-9999.ebuild
@@ -1,7 +1,7 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=6
+EAPI=7
 
 JAVA_PKG_IUSE="doc source"
 
@@ -18,7 +18,8 @@ KEYWORDS=""
 
 CDEPEND="dev-java/commons-jexl:2
        dev-java/commons-compress:0
-       dev-java/commons-logging:0"
+       dev-java/commons-logging:0
+       dev-java/gradle-bin:*"
 
 DEPEND=">=virtual/jdk-1.8
        ${CDEPEND}"

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