commit: 90360a7c028f7f1eccfbcf57b10428481a003ac8 Author: Mikle Kolyada <zlogene <AT> gentoo <DOT> org> AuthorDate: Thu May 2 18:47:53 2019 +0000 Commit: Mikle Kolyada <zlogene <AT> gentoo <DOT> org> CommitDate: Thu May 2 18:47:53 2019 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=90360a7c
sci-chemistry/ball: remove last rited package Signed-off-by: Mikle Kolyada <zlogene <AT> gentoo.org> sci-chemistry/ball/Manifest | 1 - sci-chemistry/ball/ball-1.5.0_pre20180419.ebuild | 100 ------ .../ball/files/ball-1.5.0-gnuinstalldirs.patch | 355 --------------------- sci-chemistry/ball/metadata.xml | 36 --- 4 files changed, 492 deletions(-) diff --git a/sci-chemistry/ball/Manifest b/sci-chemistry/ball/Manifest deleted file mode 100644 index 71590f52041..00000000000 --- a/sci-chemistry/ball/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST ball-1.5.0_pre20180419.tar.gz 37577697 BLAKE2B 44db256dad4703115ca381c4bc7f8393657d9d205b78c9ed55328769129dc38a2898d838bea2beb2e1e5e25184944a5724dd808917928f79c41b8216d98a6677 SHA512 a5cf9680468636c6b3de950f058d1bedb9c2d9ef7b5ba1af60e4b79fab3e6bae9cd814ec3238703075ae66c5a637d1ba8281ce7f11ac842133af91c000c983c3 diff --git a/sci-chemistry/ball/ball-1.5.0_pre20180419.ebuild b/sci-chemistry/ball/ball-1.5.0_pre20180419.ebuild deleted file mode 100644 index b4d49d1fb14..00000000000 --- a/sci-chemistry/ball/ball-1.5.0_pre20180419.ebuild +++ /dev/null @@ -1,100 +0,0 @@ -# Copyright 1999-2018 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 ) -COMMIT=e80b5e2021a72faa36bf9e35207998d4590f2cf4 -inherit cmake-utils python-single-r1 - -DESCRIPTION="Biochemical Algorithms Library" -HOMEPAGE="https://github.com/BALL-Project/ball"; -SRC_URI="https://github.com/BALL-Project/${PN}/archive/${COMMIT}.tar.gz -> ${P}.tar.gz" - -SLOT="0" -LICENSE="LGPL-2 fftw? ( GPL-3 ) openbabel? ( GPL-3 )" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="cuda doc +fftw +gui lpsolve mpi openbabel +python svm test threads webengine" - -REQUIRED_USE=" - python? ( ${PYTHON_REQUIRED_USE} ) - threads? ( fftw ) - webengine? ( gui ) -" - -RDEPEND=" - dev-cpp/eigen:3 - dev-libs/boost:= - dev-qt/qtcore:5 - dev-qt/qtnetwork:5 - dev-qt/qtxml:5 - media-libs/glew:0= - virtual/opengl - x11-libs/libX11 - cuda? ( dev-util/nvidia-cuda-toolkit ) - fftw? ( sci-libs/fftw:3.0=[threads?] ) - gui? ( - dev-qt/qtgui:5 - dev-qt/qtopengl:5 - dev-qt/qtprintsupport:5 - dev-qt/qttest:5 - dev-qt/qtwidgets:5 - ) - lpsolve? ( sci-mathematics/lpsolve ) - mpi? ( virtual/mpi ) - openbabel? ( sci-chemistry/openbabel:= ) - python? ( ${PYTHON_DEPS} ) - svm? ( sci-libs/libsvm:= ) - webengine? ( - dev-qt/qtwebchannel:5 - dev-qt/qtwebengine:5[widgets] - ) -" -DEPEND="${RDEPEND} - sys-devel/bison - virtual/yacc - doc? ( app-doc/doxygen[dot] ) - gui? ( dev-qt/linguist-tools:5 ) - python? ( dev-python/sip ) -" - -S="${WORKDIR}"/${PN}-${COMMIT} - -PATCHES=( "${FILESDIR}"/${PN}-1.5.0-gnuinstalldirs.patch ) - -RESTRICT="test" - -pkg_setup() { - use python && python-single-r1_pkg_setup -} - -src_configure() { - local mycmakeargs=( - -DUPDATE_TRANSLATIONS=ON - -DCMAKE_DISABLE_FIND_PACKAGE_LATEX=ON - -DCMAKE_INSTALL_DOCDIR=/usr/share/doc/${PF} - -DUSE_CUDA=$(usex cuda) - -DCMAKE_DISABLE_FIND_PACKAGE_Doxygen=$(usex !doc) - -DCMAKE_DISABLE_FIND_PACKAGE_FFTW=$(usex !fftw) - -DUSE_LPSOLVE=$(usex lpsolve) - -DUSE_MPI=$(usex mpi) - -DREQUIRE_MPI=$(usex mpi) - -DCMAKE_DISABLE_FIND_PACKAGE_OpenBabel2=$(usex !openbabel) - -DBALL_PYTHON_SUPPORT=$(usex python) - -DBALL_HAS_VIEW=$(usex gui) - -DUSE_LIBSVM=$(usex svm) - -DUSE_FFTW_THREADS=$(usex threads) - -DUSE_QTWEBENGINE=$(usex webengine) - ) - - if use fftw || use openbabel; then - mycmakeargs+=( -DBALL_LICENSE=GPL ) - fi - - cmake-utils_src_configure -} - -src_compile() { - cmake-utils_src_compile - use test && cmake-utils_src_make build_tests -} diff --git a/sci-chemistry/ball/files/ball-1.5.0-gnuinstalldirs.patch b/sci-chemistry/ball/files/ball-1.5.0-gnuinstalldirs.patch deleted file mode 100644 index f9fedc58bb6..00000000000 --- a/sci-chemistry/ball/files/ball-1.5.0-gnuinstalldirs.patch +++ /dev/null @@ -1,355 +0,0 @@ -From a8cade5ed7090c704aed53871fb664a0fe07af54 Mon Sep 17 00:00:00 2001 -From: Andreas Sturmlechner <andreas.sturmlech...@gmail.com> -Date: Sat, 21 Apr 2018 20:07:09 +0200 -Subject: [PATCH 1/3] Use GNUInstallDirs - ---- - CMakeLists.txt | 30 ++++++++++++++++-------------- - 1 file changed, 16 insertions(+), 14 deletions(-) - -diff --git a/CMakeLists.txt b/CMakeLists.txt -index be57fe90c..1a54446fb 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -65,6 +65,8 @@ INCLUDE(BALLCompilerSpecific) - # Determine BALL configuration - INCLUDE(BALLConfiguration) - -+INCLUDE(GNUInstallDirs) -+ - # We do not have a Component-based installer in MacOS - IF(NOT APPLE) - INCLUDE(BALLComponents) -@@ -473,20 +475,20 @@ SET(CMAKE_RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") - - ## These variables are used in all install-targets - IF (NOT APPLE) -- SET(BALL_RUNTIME_INSTALL_DIRECTORY "bin") -- SET(BALL_LIBRARY_INSTALL_DIRECTORY "lib") -- SET(BALL_ARCHIVE_INSTALL_DIRECTORY "lib") -- SET(BALL_HEADER_INSTALL_DIRECTORY ".") -- SET(BALL_DATA_INSTALL_DIRECTORY "share/BALL") -- SET(BALL_DOCUMENTATION_INSTALL_DIRECTORY "share/BALL/doc") -- SET(BALL_TOOLS_INSTALL_DIRECTORY "bin/BALLTools") -+ SET(BALL_RUNTIME_INSTALL_DIRECTORY ${CMAKE_INSTALL_BINDIR}) -+ SET(BALL_LIBRARY_INSTALL_DIRECTORY ${CMAKE_INSTALL_LIBDIR}) -+ SET(BALL_ARCHIVE_INSTALL_DIRECTORY ${CMAKE_INSTALL_LIBDIR}) -+ SET(BALL_HEADER_INSTALL_DIRECTORY ${CMAKE_INSTALL_INCLUDEDIR}) -+ SET(BALL_DATA_INSTALL_DIRECTORY ${CMAKE_INSTALL_DATAROOTDIR}/BALL) -+ SET(BALL_DOCUMENTATION_INSTALL_DIRECTORY ${CMAKE_INSTALL_DOCDIR}) -+ SET(BALL_TOOLS_INSTALL_DIRECTORY ${CMAKE_INSTALL_BINDIR}/BALLTools) - - IF(WIN32) - SET(BALL_PYTHON_INSTALL_DIRECTORY "bin") - SET(BALL_PLUGIN_INSTALL_DIRECTORY "bin") - ELSE() -- SET(BALL_PYTHON_INSTALL_DIRECTORY "lib") -- SET(BALL_PLUGIN_INSTALL_DIRECTORY "lib") -+ SET(BALL_PYTHON_INSTALL_DIRECTORY ${CMAKE_INSTALL_LIBDIR}) -+ SET(BALL_PLUGIN_INSTALL_DIRECTORY ${CMAKE_INSTALL_LIBDIR}) - ENDIF() - ENDIF() - -@@ -710,21 +712,21 @@ IF(NOT APPLE) - ## care of data files and headers - IF (NOT "${CMAKE_INSTALL_PREFIX}" STREQUAL ".") - ### Install the data directories -- INSTALL(DIRECTORY data DESTINATION "${BALL_DATA_INSTALL_DIRECTORY}" COMPONENT ${COMPONENT_LIBBALL}) -+ INSTALL(DIRECTORY data/ DESTINATION "${BALL_DATA_INSTALL_DIRECTORY}" COMPONENT ${COMPONENT_LIBBALL}) - - ### Install the includes -- INSTALL(DIRECTORY include DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}" COMPONENT ${COMPONENT_LIBBALL_DEV}) -+ INSTALL(DIRECTORY include/ DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}" COMPONENT ${COMPONENT_LIBBALL_DEV}) - ENDIF() - - ## The configured files have to be copied in any case - INSTALL(FILES ${PROJECT_BINARY_DIR}/include/BALL/CONFIG/config.h -- DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}/include/BALL/CONFIG" -+ DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}/BALL/CONFIG" - COMPONENT ${COMPONENT_LIBBALL_DEV} - ) - - INSTALL(FILES - ${PROJECT_BINARY_DIR}/include/BALL/PYTHON/BALLPythonConfig.h -- DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}/include/BALL/PYTHON" -+ DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}/BALL/PYTHON" - COMPONENT ${COMPONENT_LIBBALL_DEV} - ) - -@@ -866,7 +868,7 @@ EXPORT(PACKAGE BALL) - # Generate CMake package configuration for BALL installation - IF(NOT APPLE) - # Installation path for BALL CMake package configuration files -- SET(BALL_CMAKE_EXPORT_PATH "lib/cmake/BALL" CACHE PATH "Path to the cmake package configuration files") -+ SET(BALL_CMAKE_EXPORT_PATH ${CMAKE_INSTALL_LIBDIR}/cmake/BALL CACHE PATH "Path to the cmake package configuration files") - - LIST(REMOVE_ITEM BALL_INCLUDE_DIRS "${PROJECT_BINARY_DIR}/include") - LIST(REMOVE_ITEM BALL_INCLUDE_DIRS "${PROJECT_SOURCE_DIR}/include") --- -2.17.0 - - -From 17cbef40ad91cf051ca83b1ccf53dd2ccb22fc8d Mon Sep 17 00:00:00 2001 -From: Andreas Sturmlechner <andreas.sturmlech...@gmail.com> -Date: Sat, 21 Apr 2018 21:20:01 +0200 -Subject: [PATCH 2/3] Drop superfluous cmake variables - ---- - CMakeLists.txt | 34 +++++++------------ - cmake/BALLDoc.cmake | 6 ++-- - source/APPLICATIONS/BALLVIEW/CMakeLists.txt | 4 +-- - source/EXTENSIONS/BALLAXY/CMakeLists.txt | 2 +- - source/EXTENSIONS/JUPYTER/CMakeLists.txt | 2 +- - source/EXTENSIONS/PRESENTABALL/CMakeLists.txt | 2 +- - source/PYTHON/EXTENSIONS/CMakeLists.txt | 12 +++---- - 7 files changed, 27 insertions(+), 35 deletions(-) - -diff --git a/CMakeLists.txt b/CMakeLists.txt -index 1a54446fb..9b9f3513b 100644 ---- a/CMakeLists.txt -+++ b/CMakeLists.txt -@@ -475,14 +475,6 @@ SET(CMAKE_RUNTIME_OUTPUT_DIRECTORY "${PROJECT_BINARY_DIR}/bin") - - ## These variables are used in all install-targets - IF (NOT APPLE) -- SET(BALL_RUNTIME_INSTALL_DIRECTORY ${CMAKE_INSTALL_BINDIR}) -- SET(BALL_LIBRARY_INSTALL_DIRECTORY ${CMAKE_INSTALL_LIBDIR}) -- SET(BALL_ARCHIVE_INSTALL_DIRECTORY ${CMAKE_INSTALL_LIBDIR}) -- SET(BALL_HEADER_INSTALL_DIRECTORY ${CMAKE_INSTALL_INCLUDEDIR}) -- SET(BALL_DATA_INSTALL_DIRECTORY ${CMAKE_INSTALL_DATAROOTDIR}/BALL) -- SET(BALL_DOCUMENTATION_INSTALL_DIRECTORY ${CMAKE_INSTALL_DOCDIR}) -- SET(BALL_TOOLS_INSTALL_DIRECTORY ${CMAKE_INSTALL_BINDIR}/BALLTools) -- - IF(WIN32) - SET(BALL_PYTHON_INSTALL_DIRECTORY "bin") - SET(BALL_PLUGIN_INSTALL_DIRECTORY "bin") -@@ -693,18 +685,18 @@ IF(NOT APPLE) - INSTALL(TARGETS BALL - EXPORT BALLExportGroup - COMPONENT "${COMPONENT_LIBBALL}" -- RUNTIME DESTINATION "${BALL_RUNTIME_INSTALL_DIRECTORY}" -- LIBRARY DESTINATION "${BALL_LIBRARY_INSTALL_DIRECTORY}" -- ARCHIVE DESTINATION "${BALL_ARCHIVE_INSTALL_DIRECTORY}" -+ RUNTIME DESTINATION "${CMAKE_INSTALL_BINDIR}" -+ LIBRARY DESTINATION "${CMAKE_INSTALL_LIBDIR}" -+ ARCHIVE DESTINATION "${CMAKE_INSTALL_LIBDIR}" - ) - - IF(BALL_HAS_VIEW) - INSTALL(TARGETS VIEW - EXPORT BALLExportGroup - COMPONENT "${COMPONENT_LIBVIEW}" -- RUNTIME DESTINATION "${BALL_RUNTIME_INSTALL_DIRECTORY}" -- LIBRARY DESTINATION "${BALL_LIBRARY_INSTALL_DIRECTORY}" -- ARCHIVE DESTINATION "${BALL_ARCHIVE_INSTALL_DIRECTORY}" -+ RUNTIME DESTINATION "${CMAKE_INSTALL_BINDIR}" -+ LIBRARY DESTINATION "${CMAKE_INSTALL_LIBDIR}" -+ ARCHIVE DESTINATION "${CMAKE_INSTALL_LIBDIR}" - ) - ENDIF() - -@@ -712,21 +704,21 @@ IF(NOT APPLE) - ## care of data files and headers - IF (NOT "${CMAKE_INSTALL_PREFIX}" STREQUAL ".") - ### Install the data directories -- INSTALL(DIRECTORY data/ DESTINATION "${BALL_DATA_INSTALL_DIRECTORY}" COMPONENT ${COMPONENT_LIBBALL}) -+ INSTALL(DIRECTORY data/ DESTINATION ${CMAKE_INSTALL_DATAROOTDIR}/BALL COMPONENT ${COMPONENT_LIBBALL}) - - ### Install the includes -- INSTALL(DIRECTORY include/ DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}" COMPONENT ${COMPONENT_LIBBALL_DEV}) -+ INSTALL(DIRECTORY include/ DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}" COMPONENT ${COMPONENT_LIBBALL_DEV}) - ENDIF() - - ## The configured files have to be copied in any case - INSTALL(FILES ${PROJECT_BINARY_DIR}/include/BALL/CONFIG/config.h -- DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}/BALL/CONFIG" -+ DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}/BALL/CONFIG" - COMPONENT ${COMPONENT_LIBBALL_DEV} - ) - - INSTALL(FILES - ${PROJECT_BINARY_DIR}/include/BALL/PYTHON/BALLPythonConfig.h -- DESTINATION "${BALL_HEADER_INSTALL_DIRECTORY}/BALL/PYTHON" -+ DESTINATION "${CMAKE_INSTALL_INCLUDEDIR}/BALL/PYTHON" - COMPONENT ${COMPONENT_LIBBALL_DEV} - ) - -@@ -744,14 +736,14 @@ IF(NOT APPLE) - FOREACH(LIB ${BALL_DEP_OPT_DLLS}) - STRING(TOLOWER "${LIB}" LOWER_LIB) - INSTALL(FILES "${LIB}" -- DESTINATION "${BALL_RUNTIME_INSTALL_DIRECTORY}" -+ DESTINATION "${CMAKE_INSTALL_BINDIR}" - COMPONENT ${COMPONENT_LIBBALL}) - ENDFOREACH() - - IF(QT_DEPLOY_EXECUTABLE) - INSTALL(CODE -- "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${BALL_RUNTIME_INSTALL_DIRECTORY}/BALL.dll) -- EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${BALL_RUNTIME_INSTALL_DIRECTORY}/VIEW.dll)" -+ "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${CMAKE_INSTALL_BINDIR}/BALL.dll) -+ EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${CMAKE_INSTALL_BINDIR}/VIEW.dll)" - COMPONENT "${COMPONENT_LIBBALL}") - ENDIF() - ENDIF() -diff --git a/cmake/BALLDoc.cmake b/cmake/BALLDoc.cmake -index 061b9c95f..2d7c17466 100644 ---- a/cmake/BALLDoc.cmake -+++ b/cmake/BALLDoc.cmake -@@ -20,7 +20,7 @@ ENDIF() - - IF(NOT APPLE) - INSTALL(DIRECTORY "${PROJECT_SOURCE_DIR}/doc/examples/" -- DESTINATION "${BALL_DOCUMENTATION_INSTALL_DIRECTORY}/EXAMPLES" -+ DESTINATION "${CMAKE_INSTALL_DOCDIR}/EXAMPLES" - COMPONENT "${COMPONENT_DOCUMENTATION_EXAMPLES}") - ENDIF() - -@@ -53,7 +53,7 @@ IF (DOXYGEN_FOUND) - - IF(NOT APPLE) - INSTALL(DIRECTORY "${PROJECT_BINARY_DIR}/doc/html/" -- DESTINATION "${BALL_DOCUMENTATION_INSTALL_DIRECTORY}/BALL" -+ DESTINATION "${CMAKE_INSTALL_DOCDIR}/BALL" - COMPONENT "${COMPONENT_DOCUMENTATION_HTML}" - ) - ENDIF() -@@ -107,7 +107,7 @@ IF (LATEX_COMPILER AND DVIPS_CONVERTER) - - IF(NOT APPLE) - INSTALL(FILES ${PROJECT_BINARY_DIR}/doc/tutorial.pdf -- DESTINATION "${BALL_DOCUMENTATION_INSTALL_DIRECTORY}/TUTORIAL" -+ DESTINATION "${CMAKE_INSTALL_DOCDIR}/TUTORIAL" - COMPONENT "${COMPONENT_DOCUMENTATION_PDF}" - OPTIONAL - ) -diff --git a/source/APPLICATIONS/BALLVIEW/CMakeLists.txt b/source/APPLICATIONS/BALLVIEW/CMakeLists.txt -index b4b96c31c..5fd21ee68 100644 ---- a/source/APPLICATIONS/BALLVIEW/CMakeLists.txt -+++ b/source/APPLICATIONS/BALLVIEW/CMakeLists.txt -@@ -59,13 +59,13 @@ IF(APPLE) - ELSE() - INSTALL(TARGETS BALLView - COMPONENT "${COMPONENT_BALLVIEW}" -- RUNTIME DESTINATION "${BALL_RUNTIME_INSTALL_DIRECTORY}" -+ RUNTIME DESTINATION "${CMAKE_INSTALL_BINDIR}" - BUNDLE DESTINATION "${BALL_BUNDLE_INSTALL_DIRECTORY}" - ) - - IF(WIN32) - IF(QT_DEPLOY_EXECUTABLE) -- INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${BALL_RUNTIME_INSTALL_DIRECTORY}/BALLView.exe)" -+ INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${CMAKE_INSTALL_BINDIR}/BALLView.exe)" - COMPONENT "${COMPONENT_BALLVIEW}") - ENDIF() - ENDIF() -diff --git a/source/EXTENSIONS/BALLAXY/CMakeLists.txt b/source/EXTENSIONS/BALLAXY/CMakeLists.txt -index 2fdfcbeed..1eed12c37 100644 ---- a/source/EXTENSIONS/BALLAXY/CMakeLists.txt -+++ b/source/EXTENSIONS/BALLAXY/CMakeLists.txt -@@ -66,7 +66,7 @@ IF(NOT APPLE) - - IF(WIN32) - IF(QT_DEPLOY_EXECUTABLE) -- INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${BALL_RUNTIME_INSTALL_DIRECTORY}/pluginBALLaxy.dll)" -+ INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${CMAKE_INSTALL_BINDIR}/pluginBALLaxy.dll)" - COMPONENT "Unspecified") - ENDIF() - ENDIF() -diff --git a/source/EXTENSIONS/JUPYTER/CMakeLists.txt b/source/EXTENSIONS/JUPYTER/CMakeLists.txt -index bb7e91921..24a459fbf 100644 ---- a/source/EXTENSIONS/JUPYTER/CMakeLists.txt -+++ b/source/EXTENSIONS/JUPYTER/CMakeLists.txt -@@ -78,7 +78,7 @@ IF(NOT APPLE) - - IF(WIN32) - IF(QT_DEPLOY_EXECUTABLE) -- INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${BALL_RUNTIME_INSTALL_DIRECTORY}/pluginJupyter.dll)" -+ INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${CMAKE_INSTALL_BINDIR}/pluginJupyter.dll)" - COMPONENT "Unspecified") - ENDIF() - ENDIF() -diff --git a/source/EXTENSIONS/PRESENTABALL/CMakeLists.txt b/source/EXTENSIONS/PRESENTABALL/CMakeLists.txt -index 8606f2f26..ad027fd03 100644 ---- a/source/EXTENSIONS/PRESENTABALL/CMakeLists.txt -+++ b/source/EXTENSIONS/PRESENTABALL/CMakeLists.txt -@@ -66,7 +66,7 @@ IF(NOT APPLE) - - IF(WIN32) - IF(QT_DEPLOY_EXECUTABLE) -- INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${BALL_RUNTIME_INSTALL_DIRECTORY}/pluginPresentaBALL.dll)" -+ INSTALL(CODE "EXECUTE_PROCESS(COMMAND ${QT_DEPLOY_EXECUTABLE} \$\{CMAKE_INSTALL_PREFIX\}/${CMAKE_INSTALL_BINDIR}/pluginPresentaBALL.dll)" - COMPONENT "Unspecified") - ENDIF() - ENDIF() -diff --git a/source/PYTHON/EXTENSIONS/CMakeLists.txt b/source/PYTHON/EXTENSIONS/CMakeLists.txt -index 590e1de3a..374732519 100644 ---- a/source/PYTHON/EXTENSIONS/CMakeLists.txt -+++ b/source/PYTHON/EXTENSIONS/CMakeLists.txt -@@ -49,15 +49,15 @@ IF(BALL_PYTHON_SUPPORT) - IF(NOT APPLE) - INSTALL(TARGETS BALLCoremodule - COMPONENT "${COMPONENT_PYTHON_BINDINGS_BALL}" -- RUNTIME DESTINATION ${BALL_RUNTIME_INSTALL_DIRECTORY} -- LIBRARY DESTINATION ${BALL_LIBRARY_INSTALL_DIRECTORY} -+ RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} -+ LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR} - ) - - IF(BALL_HAS_VIEW) - INSTALL(TARGETS VIEWmodule - COMPONENT "${COMPONENT_PYTHON_BINDINGS_VIEW}" -- RUNTIME DESTINATION ${BALL_RUNTIME_INSTALL_DIRECTORY} -- LIBRARY DESTINATION ${BALL_LIBRARY_INSTALL_DIRECTORY} -+ RUNTIME DESTINATION ${CMAKE_INSTALL_BINDIR} -+ LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR} - ) - ENDIF() - -@@ -69,7 +69,7 @@ IF(BALL_PYTHON_SUPPORT) - IF (WIN32) - # INSTALL(FILES ${PYTHON_EXECUTABLE} - # COMPONENT "${COMPONENT_PYTHON_BINDINGS_BALL}" -- # DESTINATION "${BALL_RUNTIME_INSTALL_DIRECTORY}" -+ # DESTINATION "${CMAKE_INSTALL_BINDIR}" - #) - - -@@ -78,7 +78,7 @@ IF(BALL_PYTHON_SUPPORT) - - INSTALL(DIRECTORY "${PYTHON_SITE_PACKAGES_DIR}" - COMPONENT "${COMPONENT_PYTHON_BINDINGS_BALL}" -- DESTINATION "${BALL_RUNTIME_INSTALL_DIRECTORY}" -+ DESTINATION "${CMAKE_INSTALL_BINDIR}" - ) - ENDIF () - ENDIF() --- -2.17.0 - - -From 666ca19b00b14752e69c05600725724fb4f6d488 Mon Sep 17 00:00:00 2001 -From: Andreas Sturmlechner <andreas.sturmlech...@gmail.com> -Date: Sat, 21 Apr 2018 22:02:14 +0200 -Subject: [PATCH 3/3] Install html doc into "html" dir - ---- - cmake/BALLDoc.cmake | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/cmake/BALLDoc.cmake b/cmake/BALLDoc.cmake -index 2d7c17466..a070613c8 100644 ---- a/cmake/BALLDoc.cmake -+++ b/cmake/BALLDoc.cmake -@@ -53,7 +53,7 @@ IF (DOXYGEN_FOUND) - - IF(NOT APPLE) - INSTALL(DIRECTORY "${PROJECT_BINARY_DIR}/doc/html/" -- DESTINATION "${CMAKE_INSTALL_DOCDIR}/BALL" -+ DESTINATION "${CMAKE_INSTALL_DOCDIR}/html" - COMPONENT "${COMPONENT_DOCUMENTATION_HTML}" - ) - ENDIF() --- -2.17.0 - diff --git a/sci-chemistry/ball/metadata.xml b/sci-chemistry/ball/metadata.xml deleted file mode 100644 index 6f18011f2e0..00000000000 --- a/sci-chemistry/ball/metadata.xml +++ /dev/null @@ -1,36 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="project"> - <email>sci-chemis...@gentoo.org</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> -Rapid Software Prototyping can significantly reduce development times in the -field of Computational Molecular Biology and Molecular Modeling. -BALL (Biochemical Algorithms Library) is an application framework in C++ that -has been specifically designed for this purpose. It provides an extensive set -of data structures as well as classes for Molecular Mechanics, advanced -solvation methods, comparison and analysis of protein structures, file -import/export, and visualization . - -BALL has been carefully designed to be robust, easy to use, and open to -extensions. Especially its extensibility which results from an object-oriented -and generic programming approach distinguishes it from other software packages. -BALL is well suited to serve as a public repository for reliable data -structures and algorithms. - -Based on BALL we have developed a stand-alone tool for molecular visualization, -BALLView . BALLView makes the broad functionality available through an -integrated user-friendly GUI. - </longdescription> - <use> - <flag name="cuda">Include cuda support</flag> - <flag name="fftw">Build with <pkg>sci-libs/fftw</pkg> (switching BALL to GPL3)</flag> - <flag name="gui">Build VIEW library required for visualization and graphical user interfaces</flag> - <flag name="lpsolve">Enable support for the Mixed Integer Linear Programming solver</flag> - <flag name="openbabel">Enable support for <pkg>sci-chemistry/openbabel</pkg> (switching BALL to GPL3)</flag> - <flag name="svm">Enable support for the Support Vector Machine module</flag> - <flag name="webengine">Enable QtWebEngine support with Qt5 (requires gui)</flag> - </use> -</pkgmetadata>
