[gentoo-commits] proj/sci:master commit in: sci-biology/staden/

[Martin Mokrejs]

commit:     cad3d25dae697461e1a6d295f2bdf99e9c2f626a
Author:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Tue Oct 22 10:51:46 2019 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Tue Oct 22 10:51:46 2019 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=cad3d25d

sci-biology/staden: sourceforge moved SVN repo URL

Also, somehow I cannot set "${S}" to src because svn would checkout the
source tree there, so one would need ./src/src to access configure.in.
Overwriting "${S}" inside each function helps.

Package-Manager: Portage-2.3.75, Repoman-2.3.17
Signed-off-by: Martin Mokrejs <mmokrejs <AT> fold.natur.cuni.cz>

 sci-biology/staden/staden-9999.ebuild | 16 +++++++++++++---
 1 file changed, 13 insertions(+), 3 deletions(-)

diff --git a/sci-biology/staden/staden-9999.ebuild 
b/sci-biology/staden/staden-9999.ebuild
index 0253c9eb5..4be43217f 100644
--- a/sci-biology/staden/staden-9999.ebuild
+++ b/sci-biology/staden/staden-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2016 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=5
@@ -9,8 +9,7 @@ inherit autotools-utils flag-o-matic fortran-2 multilib 
subversion
 
 DESCRIPTION="DNA sequence assembly (gap4, gap5), editing and analysis tools 
(Spin)"
 HOMEPAGE="http://sourceforge.net/projects/staden/";
-SRC_URI=""
-ESVN_REPO_URI="https://staden.svn.sourceforge.net/svnroot/staden/staden/trunk/src";
+ESVN_REPO_URI="https://svn.code.sf.net/p/${PN}/code/${PN}/trunk";
 
 LICENSE="staden"
 SLOT="0"
@@ -42,6 +41,7 @@ RDEPEND="${DEPEND}
 AUTOTOOLS_IN_SOURCE_BUILD=1
 
 src_prepare() {
+       cd "${WORKDIR}"/"${P}"/src || die
        sed \
                -e 's:svnversion:false:' \
                -i configure.in || die
@@ -50,6 +50,8 @@ src_prepare() {
 }
 
 src_configure() {
+       cd "${WORKDIR}"/"${P}"/src || die
+       S="${WORKDIR}"/"${P}"/src
        local myeconfargs=()
        use X && myeconfargs+=( --with-x )
        myeconfargs+=(
@@ -62,7 +64,15 @@ src_configure() {
        sed -e "s/^SVNVERS.*/SVNVERS = "${ESVN_REVISION}"/" -i system.mk || die
 }
 
+src_compile(){
+       cd "${WORKDIR}"/"${P}"/src || die
+       S="${WORKDIR}"/"${P}"/src
+       default
+}
+
 src_install() {
+       cd "${WORKDIR}"/"${P}"/src || die
+       S="${WORKDIR}"/"${P}"/src
        autotools-utils_src_install SVN_VERSION="${ESVN_REVISION}"
        cat >> "${T}"/99staden <<- EOF
        STADENROOT="${EPREFIX}"/usr/share/staden