commit: 9fb36b6a13413ad351f954bc1733351af4d64b79
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Nov 10 12:20:25 2019 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Nov 10 12:20:25 2019 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=9fb36b6a
sci-libs/nibabel: version bump 2.5.1
with added test suite support
Package-Manager: Portage-2.3.78, Repoman-2.3.17
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-libs/nibabel/metadata.xml | 12 +++++-----
sci-libs/nibabel/nibabel-2.5.1.ebuild | 42 +++++++++++++++++++++++++++++++++++
2 files changed, 48 insertions(+), 6 deletions(-)
diff --git a/sci-libs/nibabel/metadata.xml b/sci-libs/nibabel/metadata.xml
index 59e566e2d..66f8b64ec 100644
--- a/sci-libs/nibabel/metadata.xml
+++ b/sci-libs/nibabel/metadata.xml
@@ -10,12 +10,12 @@
<name>Gentoo Science Project</name>
</maintainer>
<longdescription lang="en">
-The package provides read and write access to some common medical and
-neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2), GIFTI,
-NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and write Freesurfer
-geometry, and read Freesurfer morphometry and annotation files. There is some
-very limited support for DICOM. NiBabel is the successor of PyNIfTI.
-</longdescription>
+ The package provides read and write access to some common
medical and
+ neuroimaging file formats, including: ANALYZE (plain, SPM99,
SPM2), GIFTI,
+ NIfTI1, MINC, MGH and ECAT as well as PAR/REC. It can read and
write Freesurfer
+ geometry, and read Freesurfer morphometry and annotation files.
There is some
+ very limited support for DICOM. NiBabel is the successor of
PyNIfTI.
+ </longdescription>
<use>
<flag name="dicom">Adds limited read support for the DICOM
imaging format.</flag>
</use>
diff --git a/sci-libs/nibabel/nibabel-2.5.1.ebuild
b/sci-libs/nibabel/nibabel-2.5.1.ebuild
new file mode 100644
index 000000000..a76565117
--- /dev/null
+++ b/sci-libs/nibabel/nibabel-2.5.1.ebuild
@@ -0,0 +1,42 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="Access a cacophony of neuro-imaging file formats"
+HOMEPAGE="http://nipy.org/nibabel/";
+SRC_URI="https://github.com/nipy/nibabel/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+KEYWORDS="~amd64 ~x86"
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="dicom doc test"
+
+RDEPEND="
+ dev-python/numpy[${PYTHON_USEDEP}]
+ sci-libs/scipy[${PYTHON_USEDEP}]
+ dev-python/mock[${PYTHON_USEDEP}]
+ dicom? (
+ sci-libs/pydicom[${PYTHON_USEDEP}]
+ dev-python/pillow[${PYTHON_USEDEP}]
+ )
+"
+DEPEND="
+ dev-python/setuptools[${PYTHON_USEDEP}]
+ test? (
+ ${RDEPEND}
+ dev-python/nose[${PYTHON_USEDEP}]
+ )
+ doc? ( dev-python/sphinx[${PYTHON_USEDEP}] )
+"
+
+python_test() {
+ cd "${BUILD_DIR}" || die
+ echo "backend: Agg" > matplotlibrc
+ MPLCONFIGDIR=. nosetests || die
+}
