commit: d8cb2c57a2d4c5777a8ae7ddd270678349e1e51c
Author: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
AuthorDate: Tue Sep 22 11:48:16 2020 +0000
Commit: Aisha Tammy <gentoo <AT> aisha <DOT> cc>
CommitDate: Tue Sep 22 11:48:16 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d8cb2c57
sci-chemistry/GromacsWrapper: drop package
present in ::gentoo
Package-Manager: Portage-3.0.7, Repoman-3.0.1
Signed-off-by: Aisha Tammy <gentoo <AT> aisha.cc>
.../GromacsWrapper/GromacsWrapper-9999.ebuild | 40 ----------------------
.../files/0001-Drop-chmod-hack.patch | 28 ---------------
sci-chemistry/GromacsWrapper/metadata.xml | 12 -------
3 files changed, 80 deletions(-)
diff --git a/sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild
b/sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild
deleted file mode 100644
index b51f80273..000000000
--- a/sci-chemistry/GromacsWrapper/GromacsWrapper-9999.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-if [[ $PV = *9999* ]]; then
- scm_eclass=git-r3
- EGIT_REPO_URI="
- git://github.com/orbeckst/${PN}.git
- https://github.com/orbeckst/${PN}.git";
- EGIT_BRANCH="develop"
- SRC_URI=""
- KEYWORDS=""
-else
- scm_eclass=vcs-snapshot
- SRC_URI="https://github.com/orbeckst/${PN}/archive/release-${PV}.tar.gz
-> ${P}.tar.gz"
- KEYWORDS="~amd64 ~x86"
-fi
-
-inherit eutils distutils-r1 ${scm_eclass}
-
-DESCRIPTION="Python framework for Gromacs"
-HOMEPAGE="http://orbeckst.github.com/GromacsWrapper/";
-
-LICENSE="GPL-3 LGPL-3"
-SLOT="0"
-IUSE=""
-
-DEPEND="
- >=dev-python/matplotlib-0.91.3[${PYTHON_USEDEP}]
- >=dev-python/RecSQL-0.3[${PYTHON_USEDEP}]
- >=sci-libs/scipy-0.9[${PYTHON_USEDEP}]
- "
-RDEPEND="${DEPEND}"
-
-PATCHES=(
- "${FILESDIR}/0001-Drop-chmod-hack.patch"
-)
diff --git a/sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch
b/sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch
deleted file mode 100644
index 8645df77b..000000000
--- a/sci-chemistry/GromacsWrapper/files/0001-Drop-chmod-hack.patch
+++ /dev/null
@@ -1,28 +0,0 @@
-From 49b8d9662365e0e9b0725682b8a8479de402b272 Mon Sep 17 00:00:00 2001
-From: Alexey Shvetsov <[email protected]>
-Date: Sat, 23 Mar 2013 16:40:04 +0400
-Subject: [PATCH] Drop chmod hack.
-
-It doesnt work if wrapper installed system-wide
-
-Signed-off-by: Alexey Shvetsov <[email protected]>
----
- gromacs/config.py | 2 --
- 1 file changed, 2 deletions(-)
-
-diff --git a/gromacs/config.py b/gromacs/config.py
-index cece6fc..2e686e7 100644
---- a/gromacs/config.py
-+++ b/gromacs/config.py
-@@ -619,8 +619,6 @@ del g
- # Must extract because it is part of a zipped python egg;
- # see
http://peak.telecommunity.com/DevCenter/PythonEggs#accessing-package-resources
- GridMAT_MD =
resource_filename(__name__,'external/GridMAT-MD_v1.0.2/GridMAT-MD.pl')
--os.chmod(GridMAT_MD, 0755)
--
-
- #: 3rd party bundled analysis scripts and tools; this is a list of triplets of
- #:
---
-1.8.1.5
-
diff --git a/sci-chemistry/GromacsWrapper/metadata.xml
b/sci-chemistry/GromacsWrapper/metadata.xml
deleted file mode 100644
index 7daa2ce7e..000000000
--- a/sci-chemistry/GromacsWrapper/metadata.xml
+++ /dev/null
@@ -1,12 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
-<pkgmetadata>
- <maintainer type="person">
- <email>[email protected]</email>
- <name>Alexey Shvetsov</name>
- </maintainer>
- <maintainer type="project">
- <email>[email protected]</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
-</pkgmetadata>
