commit: df13387327dc5e2b6c2f1f441ec354c2b9589d91
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Sep 28 08:32:06 2020 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Sep 28 08:43:32 2020 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=df133873
sci-chemistry/pymol-plugins-ezviz: removed unmaintained package
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
.../pymol-plugins-ezviz/files/gentoo.patch | 85 ----------------------
sci-chemistry/pymol-plugins-ezviz/metadata.xml | 22 ------
.../pymol-plugins-ezviz-1.0.2005-r1.ebuild | 55 --------------
3 files changed, 162 deletions(-)
diff --git a/sci-chemistry/pymol-plugins-ezviz/files/gentoo.patch
b/sci-chemistry/pymol-plugins-ezviz/files/gentoo.patch
deleted file mode 100644
index ba28af325..000000000
--- a/sci-chemistry/pymol-plugins-ezviz/files/gentoo.patch
+++ /dev/null
@@ -1,85 +0,0 @@
-diff --git a/ez-viz.py b/ez-viz.py
-index 1d8e847..8d50e6b 100755
---- a/ez-viz.py
-+++ b/ez-viz.py
-@@ -363,27 +363,27 @@ class PGUI:
- global splash
-
- # Images used in Presets tab
-- defaultImage = PhotoImage( file="modules\pmg_tk\startup\default.gif")
-- chains = PhotoImage(file="modules\pmg_tk\startup\chains.GIF")
-- heteroImg = PhotoImage(file="modules\pmg_tk\startup\heteroAtom.GIF")
-- ballStickImg = PhotoImage(file="C:\Program Files\DeLano
Scientific\PyMOL\modules\pmg_tk\startup\showBallStick.GIF")
-- surfaceImg = PhotoImage(file="modules\pmg_tk\startup\surface.GIF")
-- polarityImg = PhotoImage(file="modules\pmg_tk\startup\polarity.GIF")
-- puttyImg = PhotoImage(file="modules\pmg_tk\startup\putty.GIF")
-- aromaticsImg = PhotoImage(file="modules\pmg_tk\startup\showAromatics.GIF")
-- dnaImg = PhotoImage(file="modules\pmg_tk\startup\dna.GIF")
-+ defaultImage = PhotoImage(
file="GENTOOPYMOL/pmg_tk/startup/ez-viz/default.gif")
-+ chains = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/chains.gif")
-+ heteroImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/heteroAtom.gif")
-+ ballStickImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/showBallStick.gif")
-+ surfaceImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/surface.gif")
-+ polarityImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/polarity.gif")
-+ puttyImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/putty.gif")
-+ aromaticsImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/showAromatics.gif")
-+ dnaImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/dna.gif")
-
- # Movie tab images
-- ligand = PhotoImage(file="modules\pmg_tk\startup\zoom.GIF")
-- build = PhotoImage(file="modules\pmg_tk\startup\prot.GIF")
-- chainsMovieImg = PhotoImage(file="modules\pmg_tk\startup\chainsMovie.GIF")
-- rotateImg = PhotoImage(file="modules\pmg_tk\startup\Rotate.GIF")
-- playButton = PhotoImage(file="modules\pmg_tk\startup\play.GIF")
-- stopButton = PhotoImage(file="modules\pmg_tk\startup\stop.GIF")
-- rewindButton = PhotoImage(file="modules\pmg_tk\startup\Rewind.GIF")
-+ ligand = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/zoom.gif")
-+ build = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/prot.gif")
-+ chainsMovieImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/chainsMovie.gif")
-+ rotateImg =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/Rotate.gif")
-+ playButton = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/play.gif")
-+ stopButton = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/stop.gif")
-+ rewindButton =
PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/Rewind.gif")
-
- # Welcome tab image
-- splash = PhotoImage(file="modules\pmg_tk\startup\splash.GIF")
-+ splash = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/splash.gif")
- #--------------------------------------#
- # #
- # PRESETS METHODS #
-@@ -1035,7 +1035,7 @@ class PGUI:
- if tkMessageBox.askyesno('Ray Trace Image', "Do you want to ray trace
you image before saving it? Depending on your image "+
- "this make take a few minutes if you
select yes."):
- cmd.ray()
-- file = tkFileDialog.asksaveasfilename(defaultextension=".png",
initialdir="C:/Program Files/DeLano Scientific/PyMOL/")
-+ file = tkFileDialog.asksaveasfilename(defaultextension=".png",
initialdir="./")
- if len(file)>0:
- cmd.save(file)
-
-@@ -1045,7 +1045,7 @@ class PGUI:
- import tkFileDialog
- import tkMessageBox
-
-- file = tkFileDialog.asksaveasfilename(defaultextension=".pse",
initialdir='C:/Program Files/Delano Scientific/PyMOL/')
-+ file = tkFileDialog.asksaveasfilename(defaultextension=".pse",
initialdir='./')
- print file
- if len(file)>0:
- cmd.save(file)
-@@ -1574,7 +1574,7 @@ class PGUI:
- #------Open Help File---------#
- def help(self):
- import webbrowser
-- webbrowser.open('modules\pmg_tk\startup\Help\EZ-VizWebMain.html')
-+
webbrowser.open('GENTOOPYMOL/pmg_tk/startup/ez-vizHelp\EZ-VizWebMain.html')
-
- #---------------------------------------------------------------#
- # #
-@@ -2188,7 +2188,7 @@ class PGUI:
- import tkFileDialog
-
- if result == 'Open':
-- file=tkFileDialog.askopenfilename(initialdir='C:/Documents and
Settings/Administrator/My Documents/')
-+ file=tkFileDialog.askopenfilename(initialdir='./')
- if file:
- cmd.load(file)
- self.pdbCode = file
diff --git a/sci-chemistry/pymol-plugins-ezviz/metadata.xml
b/sci-chemistry/pymol-plugins-ezviz/metadata.xml
deleted file mode 100644
index a534b14c2..000000000
--- a/sci-chemistry/pymol-plugins-ezviz/metadata.xml
+++ /dev/null
@@ -1,22 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
-<pkgmetadata>
- <maintainer type="person">
- <email>[email protected]</email>
- </maintainer>
- <maintainer type="project">
- <email>[email protected]</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
- <longdescription>
-EZ-Viz was developed as an assistance tool for the difficult to
-understand user interface of PyMOL. The standard interface is
-very complex takes a long time to learn, especially for students
-unfamiliar with the chemistry and busy researchers with little
-time to learn the commands necessary to use the PyMOL software
-to its full extent. EZ-Viz allows for users to navigate through
-PyMOL using a series of clickable buttons and tabs to complete
-all functions of the PyMol software without ever having to type
-a single command.
-</longdescription>
-</pkgmetadata>
diff --git
a/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005-r1.ebuild
b/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005-r1.ebuild
deleted file mode 100644
index b51fcfe4e..000000000
--- a/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005-r1.ebuild
+++ /dev/null
@@ -1,55 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit eutils python-r1
-
-DESCRIPTION="Assistance tool for the difficult to understand user interface of
PyMOL"
-HOMEPAGE="http://www.rit.edu/cos/ezviz/index.html";
-SRC_URI="http://www.rit.edu/cos/ezviz/EZ_Viz.zip -> ${P}.zip"
-
-SLOT="0"
-LICENSE="all-rights-reserved"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc"
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-RDEPEND="
- ${PYTHON_DEPS}
- sci-chemistry/pymol[${PYTHON_USEDEP}]"
-DEPEND="app-arch/unzip"
-
-S="${WORKDIR}/EZ_Viz Folder"
-
-src_prepare() {
- edos2unix ez-viz.py
- epatch "${FILESDIR}"/gentoo.patch
- for gif in *.GIF; do
- mv ${gif} ${gif/.GIF/.gif} || die
- done
- python_copy_sources
- preperation() {
- cd "${BUILD_DIR}" || die
- sed \
- -e "s:GENTOOPYMOL:${EPREFIX}/$(python_get_sitedir):g" \
- -i ez-viz.py || die
- }
- python_foreach_impl preperation
-}
-
-src_install() {
- installation() {
- cd "${BUILD_DIR}" || die
- python_moduleinto pmg_tk/startup/
- python_domodule *.py
- python_moduleinto pmg_tk/startup/ez-viz/
- python_domodule *.gif
- }
- python_foreach_impl installation
- python_foreach_impl python_optimize
- dodoc readme.txt
-}
