commit: 147e93b9e5f88467c7658850f251a32a68c8c24a Author: Horea Christian <chr <AT> chymera <DOT> eu> AuthorDate: Mon Sep 28 10:00:45 2020 +0000 Commit: Horea Christian <horea.christ <AT> gmail <DOT> com> CommitDate: Mon Sep 28 10:00:45 2020 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=147e93b9
sci-chemistry/shiftx: removed discontinued package Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: Horea Christian <chr <AT> chymera.eu> sci-chemistry/shiftx/files/1.1-Makefile.patch | 27 ----------------- sci-chemistry/shiftx/files/1.1-bfr-overflow.patch | 16 ---------- sci-chemistry/shiftx/metadata.xml | 8 ----- sci-chemistry/shiftx/shiftx-1.1.ebuild | 37 ----------------------- 4 files changed, 88 deletions(-) diff --git a/sci-chemistry/shiftx/files/1.1-Makefile.patch b/sci-chemistry/shiftx/files/1.1-Makefile.patch deleted file mode 100644 index f208d087f..000000000 --- a/sci-chemistry/shiftx/files/1.1-Makefile.patch +++ /dev/null @@ -1,27 +0,0 @@ - Makefile | 6 +++--- - 1 file changed, 3 insertions(+), 3 deletions(-) - -diff --git a/Makefile b/Makefile -index 5401c07..ffd8157 100644 ---- a/Makefile -+++ b/Makefile -@@ -6,8 +6,8 @@ - # E-Mail: [email protected] - # - #CC=gcc -Xcpluscomm -cckr --CC=/usr/bin/gcc --CFLAGS=-O -+#CC=/usr/bin/gcc -+#CFLAGS=-O - SYSLIB= - INCLUDES=-I/usr/include - LIBS=$(SYSLIB) -lm -@@ -25,7 +25,7 @@ OBJS=Main.o Nn.o Ssbond.o Residue.o Hetatm.o Vector.o Torison.o Cs.o Phipsi.o \ - all: shiftx - - shiftx: $(OBJS) -- $(CC) $(OBJS) $(CFLAGS) $(LIBS) -o $@ -+ $(CC) $(CFLAGS) $(LDFLAGS) $(OBJS) $(LIBS) -o $@ - - Main.o: Main.c main.h states.h nn.h ssbond.h residue.h hetatm.h cs.h \ - phipsi.h torison.h hydrogens.h rings.h es.h proline.h hbond.h \ diff --git a/sci-chemistry/shiftx/files/1.1-bfr-overflow.patch b/sci-chemistry/shiftx/files/1.1-bfr-overflow.patch deleted file mode 100644 index 68507a364..000000000 --- a/sci-chemistry/shiftx/files/1.1-bfr-overflow.patch +++ /dev/null @@ -1,16 +0,0 @@ - Display.c | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/Display.c b/Display.c -index 671d3ee..9a03c48 100644 ---- a/Display.c -+++ b/Display.c -@@ -85,7 +85,7 @@ DISPLAY_DATA *CreateDisplayData( int len, int prop, int nuc ) - void display_selected_nucleus( DISPLAY_DATA *d ) - { - int i, j; -- char nucleus[5]; -+ char nucleus[8]; - - /* Print Header Information */ - diff --git a/sci-chemistry/shiftx/metadata.xml b/sci-chemistry/shiftx/metadata.xml deleted file mode 100644 index da36ecbfc..000000000 --- a/sci-chemistry/shiftx/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Chemistry Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-chemistry/shiftx/shiftx-1.1.ebuild b/sci-chemistry/shiftx/shiftx-1.1.ebuild deleted file mode 100644 index c25718308..000000000 --- a/sci-chemistry/shiftx/shiftx-1.1.ebuild +++ /dev/null @@ -1,37 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit eutils toolchain-funcs - -DESCRIPTION="Prediction of 1H, 13C and 15N chemical shifts for proteins" -HOMEPAGE="http://shiftx.wishartlab.com/"; -SRC_URI="http://shiftx.wishartlab.com/download/${PN}.tar.gz -> ${P}.tar.gz" - -LICENSE="all-rights-reserved" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="sci-chemistry/shiftx2" - -S="${WORKDIR}"/${PN} - -DOCS="README FEATURES *.pdb *.out" - -src_prepare() { - epatch \ - "${FILESDIR}"/${PV}-Makefile.patch \ - "${FILESDIR}"/${PV}-bfr-overflow.patch -} - -src_compile() { - emake CC="$(tc-getCC)" -} - -src_install() { - dobin ${PN} - dodoc ${DOCS} -}
