commit: 8929cccdec39a6b8c5ac04972f2d7ef3e93f55e8 Author: Michał Górny <mgorny <AT> gentoo <DOT> org> AuthorDate: Fri Jan 1 01:49:32 2021 +0000 Commit: Michał Górny <mgorny <AT> gentoo <DOT> org> CommitDate: Fri Jan 1 01:50:42 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=8929cccd
sci-chemistry/nmrglue: Remove old (py3.6) Signed-off-by: Michał Górny <mgorny <AT> gentoo.org> sci-chemistry/nmrglue/Manifest | 1 - .../nmrglue/files/nmrglue-0.5-nohyper.patch | 33 -------------------- sci-chemistry/nmrglue/nmrglue-0.5-r1.ebuild | 35 ---------------------- 3 files changed, 69 deletions(-) diff --git a/sci-chemistry/nmrglue/Manifest b/sci-chemistry/nmrglue/Manifest index b1414f469d9..a887763be6c 100644 --- a/sci-chemistry/nmrglue/Manifest +++ b/sci-chemistry/nmrglue/Manifest @@ -1,2 +1 @@ -DIST nmrglue-0.5.tar.gz 142604 BLAKE2B 9a018a73bea46176fc06042013cb23b3eeb962df8a595388da536d17f1d2d4d550065c5492df28de860ea1290314d2fa1110af349be0c2a8b1b31677b3e4afbc SHA512 2a4b94eb6bae966000bfdee4dd16f4e312568915fb5f19f59f84c6deff690703f54f76366d3f9299f7ec187192ff64f2bf62836617a424d4c5c895c67d819af2 DIST nmrglue-0.7.tar.gz 166596 BLAKE2B 769dbe1330a2b610393cea07edcb7c997d219038ead0330e442b491b84a51f3d1ac0dd22a9399b1af2f97fbfbf0d24316bd834d71804b4607209c5d11f24939e SHA512 4d9959d151954f38efc7ea4f93539970bc75098403b0b5575f0c4ff6c2c25c1f08e207d2dee281109ffb2bdea53f2e7beb04e251cec1f638712dfe38430c23d5 diff --git a/sci-chemistry/nmrglue/files/nmrglue-0.5-nohyper.patch b/sci-chemistry/nmrglue/files/nmrglue-0.5-nohyper.patch deleted file mode 100644 index 103f5b154d0..00000000000 --- a/sci-chemistry/nmrglue/files/nmrglue-0.5-nohyper.patch +++ /dev/null @@ -1,33 +0,0 @@ -From ba1eee9e71623110511545c058afe2a92e139aa5 Mon Sep 17 00:00:00 2001 -From: Jonathan Helmus <[email protected]> -Date: Tue, 3 Mar 2015 19:47:05 -0600 -Subject: [PATCH] pipe_proc.py tp function correctly sets FDSIZE. - -Fixes issue #27 ---- - nmrglue/process/pipe_proc.py | 7 +++++-- - 1 file changed, 5 insertions(+), 2 deletions(-) - -diff --git a/nmrglue/process/pipe_proc.py b/nmrglue/process/pipe_proc.py -index 79b6303..8c1271c 100644 ---- a/nmrglue/process/pipe_proc.py -+++ b/nmrglue/process/pipe_proc.py -@@ -1527,13 +1527,16 @@ def tp(dic, data, hyper=False, nohyper=False, auto=False, nohdr=False): - data = np.array(p.tp_hyper(data), dtype="complex64") - else: - data = p.tp(data) -- if dic[fn2 + "QUADFLAG"] != 1 and nohyper is not True: -+ if dic[fn2 + "QUADFLAG"] != 1 and nohyper is False: - # unpack complex as needed - data = np.array(p.c2ri(data), dtype="complex64") - - # update the dimentionality and order - dic["FDSLICECOUNT"] = data.shape[0] -- if data.dtype == 'float32': -+ if (data.dtype == 'float32') and (nohyper is True): -+ # when nohyper is True and the new last dimension was complex -+ # prior to transposing then FDSIZE is set as if the dimension was -+ # converted to complex data, that is half the actual size. - dic["FDSIZE"] = data.shape[1] / 2 - else: - dic["FDSIZE"] = data.shape[1] diff --git a/sci-chemistry/nmrglue/nmrglue-0.5-r1.ebuild b/sci-chemistry/nmrglue/nmrglue-0.5-r1.ebuild deleted file mode 100644 index 3a767944a13..00000000000 --- a/sci-chemistry/nmrglue/nmrglue-0.5-r1.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -PYTHON_COMPAT=( python3_6 ) - -inherit distutils-r1 - -DESCRIPTION="A module for working with NMR data in Python" -HOMEPAGE="https://nmrglue.com/"; -SRC_URI="https://github.com/jjhelmus/nmrglue/releases/download/v${PV}/${P}.tar.gz"; - -SLOT="0" -LICENSE="BSD" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="test" -RESTRICT="!test? ( test )" - -RDEPEND=" - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/scipy[${PYTHON_USEDEP}]" -DEPEND=" - test? ( - ${RDEPEND} - dev-python/nose[${PYTHON_USEDEP}] - ) -" - -PATCHES=( "${FILESDIR}"/${P}-nohyper.patch ) - -python_test() { - nosetests --verbosity=3 || die -}
