commit: 4c181b3959260dbe65d3801005b99f1a6e4db33c Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Tue Jan 19 14:13:12 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Tue Jan 19 14:13:12 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4c181b39
sci-biology/ESTate: remove pack, upstream gone Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> profiles/package.mask | 1 - sci-biology/ESTate/ESTate-0.5.ebuild | 50 ------------------------------------ sci-biology/ESTate/metadata.xml | 12 --------- 3 files changed, 63 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index a951d2d34..37fdc49bb 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -56,4 +56,3 @@ sci-biology/dawg sci-biology/EBARDenovo sci-biology/ensembl-tools sci-biology/ePCR -sci-biology/ESTate diff --git a/sci-biology/ESTate/ESTate-0.5.ebuild b/sci-biology/ESTate/ESTate-0.5.ebuild deleted file mode 100644 index f24e85106..000000000 --- a/sci-biology/ESTate/ESTate-0.5.ebuild +++ /dev/null @@ -1,50 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit eutils - -DESCRIPTION="ORF finding despite frameshifts, EST clustering" -HOMEPAGE="http://www.ebi.ac.uk/~guy/estate"; -SRC_URI=" - http://www.ebi.ac.uk/~guy/estate/estate.tar.gz - http://www.ebi.ac.uk/~guy/estate/thesis.ps.gz"; - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -S="${WORKDIR}"/estate - -src_prepare(){ - sed \ - -e "s/^CC/#CC/" \ - -e "s/^LDFLAGS/#LDFLAGS/" \ - -e "s/^CFLAGS/#CFLAGS/" \ - -e "s/LDFLAGS/CFLAGS/" \ - -i src/Makefile || die -} - -src_install(){ - # prevent file collision with sci-biology/hmmer-2.3.2 - newbin bin/{revcomp,revcomp_ESTate} - rm bin/revcomp || die - newbin bin/{translate,translate_ESTate} - rm bin/translate || die - dobin bin/* - doman doc/man/man1/*.1 doc/man/man7/*.7 - - insinto /usr/share/ESTate/etc - doins etc/ESTaterc - - insinto /usr/share/ESTate/example - doins example/embl59* example/drosophila* - - dodoc ANNOUNCE.txt README.txt "${DISTDIR}"/thesis.ps.gz -} - -pkg_postinst() { - optfeature "additional features" sci-biology/wcd -} diff --git a/sci-biology/ESTate/metadata.xml b/sci-biology/ESTate/metadata.xml deleted file mode 100644 index 138cb7705..000000000 --- a/sci-biology/ESTate/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata>
