commit: 295c07c0f1dc210afcb0131f0451f86b3c83b1b3
Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
AuthorDate: Mon Feb 1 07:41:14 2021 +0000
Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net>
CommitDate: Mon Feb 1 07:41:14 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=295c07c0
sci-biology/MaSuRCA: version bump 4.0.1
Package-Manager: Portage-3.0.14, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net>
.../{MaSuRCA-3.2.2.ebuild => MaSuRCA-4.0.1.ebuild} | 26 ++++++++--------------
1 file changed, 9 insertions(+), 17 deletions(-)
diff --git a/sci-biology/MaSuRCA/MaSuRCA-3.2.2.ebuild
b/sci-biology/MaSuRCA/MaSuRCA-4.0.1.ebuild
similarity index 52%
rename from sci-biology/MaSuRCA/MaSuRCA-3.2.2.ebuild
rename to sci-biology/MaSuRCA/MaSuRCA-4.0.1.ebuild
index 2f2f9ddbd..8e6d2925e 100644
--- a/sci-biology/MaSuRCA/MaSuRCA-3.2.2.ebuild
+++ b/sci-biology/MaSuRCA/MaSuRCA-4.0.1.ebuild
@@ -1,35 +1,27 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=6
+EAPI=7
DESCRIPTION="de Bruijn and OLC assembler for Sanger, Roche 454, Illumina,
Pacbio, Nanopore"
HOMEPAGE="http://www.genome.umd.edu/masurca.html
http://bioinformatics.oxfordjournals.org/content/29/21/2669
- http://biorxiv.org/content/biorxiv/early/2016/07/26/066100.full.pdf";
-SRC_URI="${P}.tar.gz
- ftp://ftp.genome.umd.edu/pub/MaSuRCA/MaSuRCA_QuickStartGuide.pdf";
+ https://biorxiv.org/content/biorxiv/early/2016/07/26/066100.full.pdf";
+SRC_URI="https://github.com/alekseyzimin/masurca/releases/download/v${PV}/${P}.tar.gz";
LICENSE="BSD GPL-2 GPL-3"
SLOT="0"
-KEYWORDS=""
-IUSE=""
+KEYWORDS="~amd64"
-DEPEND=">=dev-lang/perl-5.8
- app-arch/bzip2"
+DEPEND="
+ >=dev-lang/perl-5.8
+ app-arch/bzip2
+"
RDEPEND="${DEPEND}"
-RESTRICT="fetch"
-
-src_configure(){
- ./install.sh || die
-}
-
src_compile(){
./install.sh || die
}
-
src_install(){
dobin masurca
- dodoc sr_config_example.txt
}
