commit: 601c9013c6e86a87af3ca3b3185c285bccdf90ce Author: Martin Mokrejs <mmokrejs <AT> gmail <DOT> com> AuthorDate: Wed Mar 17 18:19:11 2021 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Wed Mar 17 18:19:11 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=601c9013
sci-biology/minimap2: new package Arguably we could do something about CPUFLAGS but as the package compiles its for for all SSE2 up to SSE4.1 combinations maybe we only should ensure -mtune and -march options were filtered by the ebuild. Package-Manager: Portage-3.0.17, Repoman-3.0.2 Signed-off-by: Martin Mokrejs <mmokrejs <AT> gmail.com> sci-biology/minimap2/metadata.xml | 15 +++++++++++++++ sci-biology/minimap2/minimap2-2.17.ebuild | 20 ++++++++++++++++++++ 2 files changed, 35 insertions(+) diff --git a/sci-biology/minimap2/metadata.xml b/sci-biology/minimap2/metadata.xml new file mode 100644 index 000000000..c9e82c96a --- /dev/null +++ b/sci-biology/minimap2/metadata.xml @@ -0,0 +1,15 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <upstream> + <remote-id type="github">minimap2</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-biology/minimap2/minimap2-2.17.ebuild b/sci-biology/minimap2/minimap2-2.17.ebuild new file mode 100644 index 000000000..e40058243 --- /dev/null +++ b/sci-biology/minimap2/minimap2-2.17.ebuild @@ -0,0 +1,20 @@ +# Copyright 2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +DESCRIPTION="splice-aware sequence aligner" +HOMEPAGE="https://github.com/lh3/minimap2"; +SRC_URI="https://github.com/lh3/minimap2/releases/download/v2.17/minimap2-2.17.tar.bz2 -> ${P}.tar.bz2" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +DEPEND="" +RDEPEND="${DEPEND}" +BDEPEND="" + +src_install(){ + dobin "${PN}" +}
