commit: 76c0d35a1a7694289c8bf7fb3ebc19a159546e86 Author: David Seifert <soap <AT> gentoo <DOT> org> AuthorDate: Sun Jun 20 20:03:49 2021 +0000 Commit: David Seifert <soap <AT> gentoo <DOT> org> CommitDate: Sun Jun 20 20:03:49 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=76c0d35a
sci-biology/bamtools: add 2.5.2 Bug: https://bugs.gentoo.org/787200 Signed-off-by: David Seifert <soap <AT> gentoo.org> sci-biology/bamtools/Manifest | 1 + sci-biology/bamtools/bamtools-2.5.2.ebuild | 33 ++++++++++++++++++++++++++++++ 2 files changed, 34 insertions(+) diff --git a/sci-biology/bamtools/Manifest b/sci-biology/bamtools/Manifest index 424c08d5159..e6d9b12cb13 100644 --- a/sci-biology/bamtools/Manifest +++ b/sci-biology/bamtools/Manifest @@ -1 +1,2 @@ DIST bamtools-2.5.1.tar.gz 549750 BLAKE2B c00b42b10e074e2c6b06f8bc9277a57080b9e99cd10080b1ad9052d59a3db353b33ecf6c30642d1651897396ea65e1e19cb15db0d58a89d4375fe34a8ec38e55 SHA512 f2c761c5bf923cf2f3db3dc54e40b4781307106b9177784f930aab619bd11fae3b343f3cfd232524580d39f0526a2a2f18efcf820fe4d9c951406bdb6b953afb +DIST bamtools-2.5.2.tar.gz 245729 BLAKE2B 5034ea1ec16b205488e421461ed74d8a98eae87eb7fc061e5928ad15512497a5338c9dbacbde51009c940acd55c25fccc2f3be2840d2821a8755a2a0b0370944 SHA512 540a4664abfbd1304600c17d47424c312a46e4238b0f0868f4037ddcc54c4487424e3d7820153084b3b512be8a4603e3ec5377a73311a617061460de1bfe49ef diff --git a/sci-biology/bamtools/bamtools-2.5.2.ebuild b/sci-biology/bamtools/bamtools-2.5.2.ebuild new file mode 100644 index 00000000000..a809a651df6 --- /dev/null +++ b/sci-biology/bamtools/bamtools-2.5.2.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +inherit cmake + +DESCRIPTION="A programmer's API and an end-user's toolkit for handling BAM files" +HOMEPAGE="https://github.com/pezmaster31/bamtools"; + +if [[ ${PV} == *9999 ]]; then + inherit git-r3 + EGIT_REPO_URI="https://github.com/pezmaster31/bamtools.git"; +else + SRC_URI="https://github.com/pezmaster31/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" + KEYWORDS="~amd64 ~x86" +fi + +LICENSE="MIT" +SLOT="0/${PV}" # no stable ABI yet + +RDEPEND=" + >=dev-libs/jsoncpp-1.8.0:= + sys-libs/zlib:=" +DEPEND="${RDEPEND}" +BDEPEND="virtual/pkgconfig" + +src_prepare() { + # delete bundled libs, just to be safe + rm -rf src/third_party/{gtest-1.6.0,jsoncpp} || die + + cmake_src_prepare +}
