commit: a67a1c84befd9b4a6653b197d1f5686e223b7cbb
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Oct 29 11:58:58 2021 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Oct 29 11:58:58 2021 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a67a1c84
dev-python/hdmf: new package (DANDI stack)
Package-Manager: Portage-3.0.28, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
.../hdmf/files/hdmf-3.1.1-new_jsonschema.patch | 10 +++++++
dev-python/hdmf/hdmf-3.1.1.ebuild | 32 ++++++++++++++++++++++
dev-python/hdmf/metadata.xml | 18 ++++++++++++
3 files changed, 60 insertions(+)
diff --git a/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch
b/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch
new file mode 100644
index 000000000..989332bb5
--- /dev/null
+++ b/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch
@@ -0,0 +1,10 @@
+--- a/setup.py 2021-09-24 00:51:55.892741725 -0400
++++ b/setup.py 2021-10-27 14:33:20.733741241 -0400
+@@ -23,7 +23,7 @@
+ 'scipy>=1.1,<2',
+ 'pandas>=1.0.5,<2',
+ 'ruamel.yaml>=0.16,<1',
+- 'jsonschema>=2.6.0,<4',
++ 'jsonschema>=2.6.0',
+ 'setuptools',
+ ]
diff --git a/dev-python/hdmf/hdmf-3.1.1.ebuild
b/dev-python/hdmf/hdmf-3.1.1.ebuild
new file mode 100644
index 000000000..1731b0d90
--- /dev/null
+++ b/dev-python/hdmf/hdmf-3.1.1.ebuild
@@ -0,0 +1,32 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{8..10} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+inherit distutils-r1
+
+DESCRIPTION="The Hierarchical Data Modeling Framework"
+HOMEPAGE="https://github.com/hdmf-dev/hdmf";
+SRC_URI="https://github.com/hdmf-dev/hdmf/releases/download/${PV}/${P}.tar.gz";
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ dev-python/h5py[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/pandas[${PYTHON_USEDEP}]
+ dev-python/ruamel-yaml[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ "
+BDEPEND=""
+
+distutils_enable_tests pytest
+
+PATCHES=(
+ "${FILESDIR}/${PN}-3.1.1-new_jsonschema.patch"
+)
diff --git a/dev-python/hdmf/metadata.xml b/dev-python/hdmf/metadata.xml
new file mode 100644
index 000000000..82da7c426
--- /dev/null
+++ b/dev-python/hdmf/metadata.xml
@@ -0,0 +1,18 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
+<pkgmetadata>
+ <maintainer type="person">
+ <email>[email protected]</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>[email protected]</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
+ The Hierarchical Data Modeling Framework, or HDMF, is a Python
package
+ for working with hierarchical data. It provides APIs for
specifying
+ data models, reading and writing data to different storage
backends,
+ and representing data with Python object.
+ </longdescription>
+</pkgmetadata>
