jlec 14/10/30 11:52:05 Modified: ChangeLog Added: apbs-1.4.1-r2.ebuild Log: sci-chemistry/apbs: Remove redundant python dir after installation (Portage version: 2.2.14/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path 1.70 sci-chemistry/apbs/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.70&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.70&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/ChangeLog?r1=1.69&r2=1.70 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v retrieving revision 1.69 retrieving revision 1.70 diff -u -r1.69 -r1.70 --- ChangeLog 30 Oct 2014 07:30:54 -0000 1.69 +++ ChangeLog 30 Oct 2014 11:52:05 -0000 1.70 @@ -1,6 +1,11 @@ # ChangeLog for sci-chemistry/apbs # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.69 2014/10/30 07:30:54 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.70 2014/10/30 11:52:05 jlec Exp $ + +*apbs-1.4.1-r2 (30 Oct 2014) + + 30 Oct 2014; Justin Lecher <[email protected]> +apbs-1.4.1-r2.ebuild: + Remove redundant python dir after installation 30 Oct 2014; Justin Lecher <[email protected]> apbs-1.4.1-r1.ebuild: Fix build problems, #527344 1.1 sci-chemistry/apbs/apbs-1.4.1-r2.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.4.1-r2.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/apbs/apbs-1.4.1-r2.ebuild?rev=1.1&content-type=text/plain Index: apbs-1.4.1-r2.ebuild =================================================================== # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.4.1-r2.ebuild,v 1.1 2014/10/30 11:52:05 jlec Exp $ EAPI=5 PYTHON_COMPAT=( python2_7 ) inherit cmake-utils distutils-r1 flag-o-matic multilib toolchain-funcs GITHUB_REV="74fcb8676de69ed04ddab8976a8b05a6caaf4d65" DESCRIPTION="Evaluation of electrostatic properties of nanoscale biomolecular systems" HOMEPAGE="http://www.poissonboltzmann.org/apbs/"; #SRC_URI="mirror://sourceforge/${PN}/${P}-source.tar.gz" SRC_URI="https://github.com/Electrostatics/apbs-pdb2pqr/archive/${GITHUB_REV}.zip -> ${P}.zip" SLOT="0" LICENSE="BSD" KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" IUSE="debug doc examples fast +fetk mpi openmp python tools" REQUIRED_USE=" mpi? ( !python ) python? ( tools fetk ${PYTHON_REQUIRED_USE} )" RDEPEND=" dev-cpp/eigen:3 dev-libs/maloc[mpi=] virtual/blas sys-libs/readline fetk? ( sci-libs/fetk sci-libs/amd sci-libs/umfpack sci-libs/superlu ) mpi? ( virtual/mpi ) python? ( ${PYTHON_DEPS} ) " DEPEND="${DEPEND} virtual/pkgconfig doc? ( app-doc/doxygen ) " S="${WORKDIR}"/${PN}-pdb2pqr-${GITHUB_REV}/${PN} PATCHES=( "${FILESDIR}"/${P}-multilib.patch "${FILESDIR}"/${P}-manip.patch "${FILESDIR}"/${P}-python.patch ) src_prepare() { cmake-utils_src_prepare append-cppflags $($(tc-getPKG_CONFIG) --cflags eigen3) sed \ -e "s:-lblas:$($(tc-getPKG_CONFIG) --libs blas):g" \ -e "/TOOLS_PATH/d" \ -i CMakeLists.txt || die use doc && MAKEOPTS+=" -j1" if use python; then unset PATCHES || die cd tools/python && distutils-r1_src_prepare fi } src_configure() { local mycmakeargs=( -DCMAKE_SKIP_RPATH=ON -DTOOLS_PATH="${ED}"/usr -DSYS_LIBPATHS="${EPREFIX}"/usr/$(get_libdir) -DLIBRARY_INSTALL_PATH=$(get_libdir) -DFETK_PATH="${EPREFIX}"/usr/ -DBUILD_SHARED_LIBS=ON -DENABLE_QUIT=OFF $(cmake-utils_use_build doc DOC) $(cmake-utils_use_build tools TOOLS) -DENABLE_BEM=OFF # ENABLE_BEM: Boundary element method using TABIPB $(cmake-utils_use_enable debug DEBUG) $(cmake-utils_use_enable debug VERBOSE_DEBUG) $(cmake-utils_use_enable fast FAST) $(cmake-utils_use_enable fetk FETK) $(cmake-utils_use_enable mpi MPI) $(cmake-utils_use_enable python PYTHON) # ENABLE_TINKER: Enable TINKER support # ENABLE_iAPBS: Enable iAPBS -DENABLE_iAPBS=ON # MAX_MEMORY: Set the maximum memory (in MB) to be used for a job ) cmake-utils_src_configure if use python; then cd tools/python && distutils-r1_src_configure fi } src_compile(){ cmake-utils_src_compile if use python; then append-ldflags -L"${S}"/lib cd tools/python && distutils-r1_src_compile fi } src_test() { cd tests || die "${PYTHON}" apbs_tester.py -l log || die grep -q 'FAILED' log && die "Tests failed" } src_install() { dodir /usr/bin cmake-utils_src_install local i for i in "${ED}"/usr/bin/*; do if [[ ! "${i}" =~ .*apbs$ ]]; then mv "${i}" "${i}-apbs" || die fi done if use python; then cd tools/python && distutils-r1_src_install rm -rf "${ED}"/usr/share/apbs/tools/python || die fi }
