commit: 8084f5f52b096ed560f8889c736a10060911e0f8 Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Mon Nov 10 13:18:12 2014 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Mon Nov 10 13:18:12 2014 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=8084f5f5
sci-biology/genseed: Bump to EAPI=5 Package-Manager: portage-2.2.14 --- sci-biology/genseed/ChangeLog | 6 +++++- sci-biology/genseed/genseed-1.0.22.ebuild | 19 ++++++++++++------- sci-biology/genseed/metadata.xml | 10 +++++----- 3 files changed, 22 insertions(+), 13 deletions(-) diff --git a/sci-biology/genseed/ChangeLog b/sci-biology/genseed/ChangeLog index b60e59d..d52eb15 100644 --- a/sci-biology/genseed/ChangeLog +++ b/sci-biology/genseed/ChangeLog @@ -1,7 +1,11 @@ # ChangeLog for sci-biology/genseed -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 10 Nov 2014; Justin Lecher <[email protected]> genseed-1.0.22.ebuild, + metadata.xml: + Bump to EAPI=5 + 13 Dec 2011; Martin Mokrejs <[email protected]> genseed-1.0.22.ebuild: ebuild doc cleanup genseed-1.0.22.ebuild diff --git a/sci-biology/genseed/genseed-1.0.22.ebuild b/sci-biology/genseed/genseed-1.0.22.ebuild index 1bf97f9..f87e06f 100644 --- a/sci-biology/genseed/genseed-1.0.22.ebuild +++ b/sci-biology/genseed/genseed-1.0.22.ebuild @@ -2,6 +2,8 @@ # Distributed under the terms of the GNU General Public License v2 # $Header: $ +EAPI=5 + DESCRIPTION="Seed-driven progressive assembly program using legacy NCBI blast, CAP3, and optionally cross_match" HOMEPAGE="http://www.coccidia.icb.usp.br/genseed/"; SRC_URI="http://www.coccidia.icb.usp.br/genseed/download/${P}.tar.gz"; @@ -11,14 +13,17 @@ SLOT="0" KEYWORDS="~x86 ~amd64" IUSE="" - # I am not sure whether we want to introduce yet another USE variable "phrap" - # This tools optionally uses cross_match if vector masking is required - # (sci-biology/phrap but it will be installed only by users having that licence. -DEPEND="sci-biology/cap3-bin - dev-lang/perl - sci-biology/ncbi-tools" + # I am not sure whether we want to introduce yet another USE variable "phrap" + # This tools optionally uses cross_match if vector masking is required + # (sci-biology/phrap but it will be installed only by users having that licence. +DEPEND=" + sci-biology/cap3-bin + dev-lang/perl + sci-biology/ncbi-tools" RDEPEND="" +S="${WORKDIR}" + src_install() { - dobin genseed.pl + newbin ${PN}.pl ${PN} } diff --git a/sci-biology/genseed/metadata.xml b/sci-biology/genseed/metadata.xml index 07b5255..2bc8930 100644 --- a/sci-biology/genseed/metadata.xml +++ b/sci-biology/genseed/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> <pkgmetadata> - <herd>sci-biology</herd> - <maintainer> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> </pkgmetadata>
