commit: 2f57a1458981371ddbaeec83168e30b231075c6b Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Thu Nov 13 12:37:44 2014 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Thu Nov 13 12:37:44 2014 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2f57a145
sci-biology/quast: Bump to new python eclasses Package-Manager: portage-2.2.14 --- sci-biology/quast/ChangeLog | 3 +++ sci-biology/quast/metadata.xml | 10 +++++----- sci-biology/quast/quast-2.2.ebuild | 26 +++++++++++++++----------- 3 files changed, 23 insertions(+), 16 deletions(-) diff --git a/sci-biology/quast/ChangeLog b/sci-biology/quast/ChangeLog index 578e834..ccf3a0e 100644 --- a/sci-biology/quast/ChangeLog +++ b/sci-biology/quast/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 13 Nov 2014; Justin Lecher <[email protected]> quast-2.2.ebuild, metadata.xml: + Bump to new python eclasses + *quast-2.2 (23 Mar 2014) 23 Mar 2014; Martin Mokrejs <[email protected]> +metadata.xml, diff --git a/sci-biology/quast/metadata.xml b/sci-biology/quast/metadata.xml index 07b5255..2bc8930 100644 --- a/sci-biology/quast/metadata.xml +++ b/sci-biology/quast/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> <pkgmetadata> - <herd>sci-biology</herd> - <maintainer> - <email>[email protected]</email> - <name>Martin Mokrejs</name> - </maintainer> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/quast/quast-2.2.ebuild b/sci-biology/quast/quast-2.2.ebuild index 5f6c9b9..3839147 100644 --- a/sci-biology/quast/quast-2.2.ebuild +++ b/sci-biology/quast/quast-2.2.ebuild @@ -4,31 +4,35 @@ EAPI=5 -inherit python +PYTHON_COMPAT=( python2_7 ) + +inherit python-r1 DESCRIPTION="Compare quality of multiple genome assemblies to each other" HOMEPAGE="http://bioinf.spbau.ru/QUAST"; -SRC_URI="http://sourceforge.net/projects/quast/files/"$P".tar.gz"; +SRC_URI="http://sourceforge.net/projects/quast/files/${P}.tar.gz"; LICENSE="GPL-2" SLOT="0" KEYWORDS="" IUSE="" -DEPEND="dev-python/matplotlib - sci-biology/mummer - sci-biology/glimmerhmm" -# sci-biology/GAGE -# sci-biology/GeneMarkS -# sci-biology/MetaGeneMark" +DEPEND=" + dev-python/matplotlib[${PYTHON_USEDEP}] + sci-biology/mummer + sci-biology/glimmerhmm" +# sci-biology/GAGE +# sci-biology/GeneMarkS +# sci-biology/MetaGeneMark" # the above packages need to be created first -RDEPEND="${DEPEND} - dev-lang/perl" +RDEPEND="${DEPEND}" src_install(){ - dobin quast.py metaquast.py + python_foreach_impl python_newscript quast.py quast + python_foreach_impl python_newscript metaquast.py metaquast + dodoc manual.html CHANGES # TODO: install lib/ subdirectory contents into some PATH and PYTHON_PATH
