commit: 75cb88a8a0d3dbc52dee2df510b2a84236dcafee
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Tue Jul 12 15:29:11 2022 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Tue Jul 12 15:29:11 2022 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=75cb88a8
dev-python/pynwb: version bump, fixed dependency versions
Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
dev-python/pynwb/pynwb-2.0.0.ebuild | 4 ++--
dev-python/pynwb/pynwb-2.0.1.ebuild | 6 +++---
dev-python/pynwb/{pynwb-2.0.1.ebuild => pynwb-2.1.0.ebuild} | 6 +++---
3 files changed, 8 insertions(+), 8 deletions(-)
diff --git a/dev-python/pynwb/pynwb-2.0.0.ebuild
b/dev-python/pynwb/pynwb-2.0.0.ebuild
index d9afd62e7..e133d027b 100644
--- a/dev-python/pynwb/pynwb-2.0.0.ebuild
+++ b/dev-python/pynwb/pynwb-2.0.0.ebuild
@@ -16,7 +16,7 @@ KEYWORDS="~amd64 ~x86"
RDEPEND="
sci-libs/hdf5[ros3(-)]
- dev-python/hdmf[${PYTHON_USEDEP}]
+ <dev-python/hdmf-3.3.2[${PYTHON_USEDEP}]
dev-python/h5py[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pandas[${PYTHON_USEDEP}]
@@ -30,7 +30,7 @@ PATCHES=(
EPYTEST_DESELECT=(
# Reported upsream:
- # https://github.com/dandi/dandischema/issues/87
+ # https://github.com/NeurodataWithoutBorders/pynwb/issues/1425
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_bad_ns
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_hdmf_common
diff --git a/dev-python/pynwb/pynwb-2.0.1.ebuild
b/dev-python/pynwb/pynwb-2.0.1.ebuild
index 9f84bdb80..3fe21370f 100644
--- a/dev-python/pynwb/pynwb-2.0.1.ebuild
+++ b/dev-python/pynwb/pynwb-2.0.1.ebuild
@@ -9,7 +9,7 @@ inherit distutils-r1
DESCRIPTION="A Python API for working with Neurodata stored in the NWB Format "
HOMEPAGE="https://github.com/NeurodataWithoutBorders/pynwb";
-SRC_URI="https://github.com/NeurodataWithoutBorders/pynwb/releases/download/${PV}/${P}.tar.gz";
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
SLOT="0"
LICENSE="BSD"
@@ -17,7 +17,7 @@ KEYWORDS="~amd64 ~x86"
RDEPEND="
sci-libs/hdf5[ros3(-)]
- dev-python/hdmf[${PYTHON_USEDEP}]
+ <dev-python/hdmf-3.3.2[${PYTHON_USEDEP}]
dev-python/h5py[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pandas[${PYTHON_USEDEP}]
@@ -27,7 +27,7 @@ BDEPEND=""
EPYTEST_DESELECT=(
# Reported upsream:
- # https://github.com/dandi/dandischema/issues/87
+ # https://github.com/NeurodataWithoutBorders/pynwb/issues/1425
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_bad_ns
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_hdmf_common
diff --git a/dev-python/pynwb/pynwb-2.0.1.ebuild
b/dev-python/pynwb/pynwb-2.1.0.ebuild
similarity index 86%
copy from dev-python/pynwb/pynwb-2.0.1.ebuild
copy to dev-python/pynwb/pynwb-2.1.0.ebuild
index 9f84bdb80..a53c4bbb0 100644
--- a/dev-python/pynwb/pynwb-2.0.1.ebuild
+++ b/dev-python/pynwb/pynwb-2.1.0.ebuild
@@ -9,7 +9,7 @@ inherit distutils-r1
DESCRIPTION="A Python API for working with Neurodata stored in the NWB Format "
HOMEPAGE="https://github.com/NeurodataWithoutBorders/pynwb";
-SRC_URI="https://github.com/NeurodataWithoutBorders/pynwb/releases/download/${PV}/${P}.tar.gz";
+SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
SLOT="0"
LICENSE="BSD"
@@ -17,7 +17,7 @@ KEYWORDS="~amd64 ~x86"
RDEPEND="
sci-libs/hdf5[ros3(-)]
- dev-python/hdmf[${PYTHON_USEDEP}]
+ >=dev-python/hdmf-3.3.2[${PYTHON_USEDEP}]
dev-python/h5py[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pandas[${PYTHON_USEDEP}]
@@ -27,7 +27,7 @@ BDEPEND=""
EPYTEST_DESELECT=(
# Reported upsream:
- # https://github.com/dandi/dandischema/issues/87
+ # https://github.com/NeurodataWithoutBorders/pynwb/issues/1425
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_bad_ns
tests/validation/test_validate.py::TestValidateScript::test_validate_file_cached_hdmf_common
