commit: fb20e3f85e6e158e7f3a13b5de473ccaba372a03 Author: David Seifert <soap <AT> gentoo <DOT> org> AuthorDate: Sun Oct 23 19:18:05 2022 +0000 Commit: David Seifert <soap <AT> gentoo <DOT> org> CommitDate: Sun Oct 23 19:18:05 2022 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=fb20e3f8
sci-biology/eugene: fix clang 16 build Closes: https://bugs.gentoo.org/875476 Signed-off-by: David Seifert <soap <AT> gentoo.org> sci-biology/eugene/eugene-4.1d-r1.ebuild | 1 + sci-biology/eugene/files/eugene-4.1d-clang16.patch | 22 ++++++++++++++++++++++ 2 files changed, 23 insertions(+) diff --git a/sci-biology/eugene/eugene-4.1d-r1.ebuild b/sci-biology/eugene/eugene-4.1d-r1.ebuild index b1d9f409c096..40fb83ffc058 100644 --- a/sci-biology/eugene/eugene-4.1d-r1.ebuild +++ b/sci-biology/eugene/eugene-4.1d-r1.ebuild @@ -27,6 +27,7 @@ PATCHES=( "${FILESDIR}"/${PN}-4.1d-fix-c++14.patch "${FILESDIR}"/${PN}-4.1d-Wformat.patch "${FILESDIR}"/${PN}-4.1d-portable-getopt.patch + "${FILESDIR}"/${PN}-4.1d-clang16.patch ) src_prepare() { diff --git a/sci-biology/eugene/files/eugene-4.1d-clang16.patch b/sci-biology/eugene/files/eugene-4.1d-clang16.patch new file mode 100644 index 000000000000..21a3ec0a8b62 --- /dev/null +++ b/sci-biology/eugene/files/eugene-4.1d-clang16.patch @@ -0,0 +1,22 @@ +--- a/src/GDIF/gdIF.c ++++ b/src/GDIF/gdIF.c +@@ -228,7 +228,7 @@ + ToY(phase, pos), (unsigned char *)st, Col[col]); + } + +-void ClosePNG() ++void ClosePNG(void) + { + int i; + +--- a/src/SensorPlugins/0_SensorTk/markov.cc ++++ b/src/SensorPlugins/0_SensorTk/markov.cc +@@ -790,7 +790,7 @@ + // cumule les valeurs des cases des codons synonymes et renvoie le total. + template<class CHAINE, typename T> T TabChaine<CHAINE,T> :: cumuleVAL (int indice) const + { +- char* codegenetique=CODEGENETIQUE; ++ const char* codegenetique=CODEGENETIQUE; + T cumul=0; + for (int i=0 ; i<64 ; i++) { + if ( codegenetique[i] == codegenetique[indice] )
