commit: f73f853373a42bd8b02c51c79651a847d0c34058 Author: Bernd Waibel <waebbl-gentoo <AT> posteo <DOT> net> AuthorDate: Mon Oct 31 14:35:10 2022 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> CommitDate: Tue Nov 15 12:01:33 2022 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f73f8533
sci-mathematics/netgen: add 6.2.2204 - OpenMP doesn't seem to be used, remove USE flag - dev-tcltk/tix doesn't seem to be used, remove dependency - dev-tcltk/togl is build internal and doesn't use a system togl installation - Stub generation from pybind11 doesn't currently work in a sandbox, see https://github.com/NGSolve/netgen/issues/126 - only depend on sci-libs/metis for USE=mpi Signed-off-by: Bernd Waibel <waebbl-gentoo <AT> posteo.net> Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org> ...tgen-6.2.2204-find-Tk-include-directories.patch | 21 ++++ ...etgen-6.2.2204-find-libjpeg-turbo-library.patch | 34 +++++ .../netgen-6.2.2204-link-against-ffmpeg.patch | 20 +++ .../netgen-6.2.2204-use-external-pybind11.patch | 30 +++++ sci-mathematics/netgen/netgen-6.2.2204.ebuild | 137 +++++++++++++++++++++ 5 files changed, 242 insertions(+) diff --git a/sci-mathematics/netgen/files/netgen-6.2.2204-find-Tk-include-directories.patch b/sci-mathematics/netgen/files/netgen-6.2.2204-find-Tk-include-directories.patch new file mode 100644 index 000000000..cf7b9d31e --- /dev/null +++ b/sci-mathematics/netgen/files/netgen-6.2.2204-find-Tk-include-directories.patch @@ -0,0 +1,21 @@ +From 53c45343f5a26841be10d930467e215da4a779f2 Mon Sep 17 00:00:00 2001 +From: Bernd Waibel <[email protected]> +Date: Sun, 30 Oct 2022 15:17:55 +0100 +Subject: [PATCH] find Tk include directories + +Signed-off-by: Bernd Waibel <[email protected]> +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -270,6 +270,9 @@ if (USE_GUI) + endif(APPLE) + find_package(OpenGL REQUIRED) + ++ include_directories(${TK_INCLUDE_PATH}/generic) ++ include_directories(${TK_INCLUDE_PATH}/unix) ++ + target_compile_definitions(netgen_gui INTERFACE -DTCL -DOPENGL -DUSE_TOGL_2 -DUSE_TCL_STUBS -DUSE_TK_STUBS) + target_include_directories(netgen_gui INTERFACE ${TCL_INCLUDE_PATH} ${TK_INCLUDE_PATH}) + target_link_libraries(netgen_gui INTERFACE ${TCL_STUB_LIBRARY} ${TK_STUB_LIBRARY}) +-- +2.38.1 + diff --git a/sci-mathematics/netgen/files/netgen-6.2.2204-find-libjpeg-turbo-library.patch b/sci-mathematics/netgen/files/netgen-6.2.2204-find-libjpeg-turbo-library.patch new file mode 100644 index 000000000..c45f5a4e4 --- /dev/null +++ b/sci-mathematics/netgen/files/netgen-6.2.2204-find-libjpeg-turbo-library.patch @@ -0,0 +1,34 @@ +From 39160b692fd051f2638f1a6e1df38eb616b6d6cb Mon Sep 17 00:00:00 2001 +From: Bernd Waibel <[email protected]> +Date: Sun, 30 Oct 2022 16:09:43 +0100 +Subject: [PATCH] find libjpeg-turbo library + +Signed-off-by: Bernd Waibel <[email protected]> +--- a/libsrc/visualization/CMakeLists.txt ++++ b/libsrc/visualization/CMakeLists.txt +@@ -7,7 +7,7 @@ target_sources(nggui PRIVATE + vssolution.cpp + visualpkg.cpp + ) +-target_link_libraries( nggui PUBLIC "$<BUILD_INTERFACE:netgen_python>" ${MPI_CXX_LIBRARIES} ${OPENGL_LIBRARIES} ) ++target_link_libraries( nggui PUBLIC "$<BUILD_INTERFACE:netgen_python>" ${MPI_CXX_LIBRARIES} ${OPENGL_LIBRARIES} ${JPEG_LIBRARIES} ) + + install(FILES + meshdoc.hpp mvdraw.hpp visual_api.hpp +--- a/nglib/CMakeLists.txt ++++ b/nglib/CMakeLists.txt +@@ -7,6 +7,11 @@ endif(USE_OCC) + + target_link_libraries(nglib PUBLIC ngcore) + ++if(TARGET JPEG::JPEG) ++ get_target_property(JPEG_LIBRARIES JPEG::JPEG IMPORTED_LOCATION_RELEASE) ++else() ++ set(JPEG_LIBRARIES ${JPEG_LIBRARY_RELEASE}) ++endif() + target_link_libraries( nglib PRIVATE ${MPI_CXX_LIBRARIES} ${CMAKE_THREAD_LIBS_INIT} ${JPEG_LIBRARIES} ${MKL_LIBRARIES} ${ZLIB_LIBRARIES} ${OCC_LIBRARIES} netgen_cgns ) + + install(TARGETS nglib netgen_cgns ${NG_INSTALL_DIR}) +-- +2.38.1 + diff --git a/sci-mathematics/netgen/files/netgen-6.2.2204-link-against-ffmpeg.patch b/sci-mathematics/netgen/files/netgen-6.2.2204-link-against-ffmpeg.patch new file mode 100644 index 000000000..6f7a8bc3c --- /dev/null +++ b/sci-mathematics/netgen/files/netgen-6.2.2204-link-against-ffmpeg.patch @@ -0,0 +1,20 @@ +From 69d9c2da29adc9b7a209e78aae950d9834683f58 Mon Sep 17 00:00:00 2001 +From: Bernd Waibel <[email protected]> +Date: Mon, 31 Oct 2022 13:07:05 +0100 +Subject: [PATCH] link against ffmpeg + +Signed-off-by: Bernd Waibel <[email protected]> +--- a/ng/CMakeLists.txt ++++ b/ng/CMakeLists.txt +@@ -28,7 +28,7 @@ if(USE_GUI) + if(APPLE) + set_target_properties(netgen PROPERTIES OUTPUT_NAME netgen) + endif(APPLE) +- target_link_libraries( netgen ${PYTHON_LIBRARIES} ${TCL_LIBRARY} ${TK_LIBRARY}) ++ target_link_libraries( netgen ${PYTHON_LIBRARIES} ${TCL_LIBRARY} ${TK_LIBRARY} ${FFMPEG_LIBRARIES}) + endif(NOT BUILD_FOR_CONDA) + + install(TARGETS nggui ${NG_INSTALL_DIR}) +-- +2.38.1 + diff --git a/sci-mathematics/netgen/files/netgen-6.2.2204-use-external-pybind11.patch b/sci-mathematics/netgen/files/netgen-6.2.2204-use-external-pybind11.patch new file mode 100644 index 000000000..ef11c8b08 --- /dev/null +++ b/sci-mathematics/netgen/files/netgen-6.2.2204-use-external-pybind11.patch @@ -0,0 +1,30 @@ +From c3c55fe646ad6934e429edd080aceae54260551c Mon Sep 17 00:00:00 2001 +From: Bernd Waibel <[email protected]> +Date: Sun, 30 Oct 2022 14:50:48 +0100 +Subject: [PATCH] use external pybind11 + +Signed-off-by: Bernd Waibel <[email protected]> +--- a/CMakeLists.txt ++++ b/CMakeLists.txt +@@ -302,7 +302,7 @@ else() + endif() + + if (USE_PYTHON) +- add_subdirectory(external_dependencies/pybind11) ++ find_package(pybind11) + find_path(PYBIND_INCLUDE_DIR pybind11/pybind11.h HINTS ${PYTHON_INCLUDE_DIR}) + if( PYBIND_INCLUDE_DIR ) + message(STATUS "Found Pybind11: ${PYBIND_INCLUDE_DIR}") +--- a/cmake/SuperBuild.cmake ++++ b/cmake/SuperBuild.cmake +@@ -154,7 +154,6 @@ endif() + ####################################################################### + if (USE_PYTHON) + find_path(PYBIND_INCLUDE_DIR pybind11/pybind11.h PATHS ${CMAKE_CURRENT_SOURCE_DIR}/external_dependencies/pybind11/include NO_DEFAULT_PATH) +- set(NG_INSTALL_PYBIND ON) + if( NOT PYBIND_INCLUDE_DIR ) + # if the pybind submodule is missing, try to initialize and update all submodules + execute_process(COMMAND git submodule update --init --recursive WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +-- +2.38.1 + diff --git a/sci-mathematics/netgen/netgen-6.2.2204.ebuild b/sci-mathematics/netgen/netgen-6.2.2204.ebuild new file mode 100644 index 000000000..06a2bf53f --- /dev/null +++ b/sci-mathematics/netgen/netgen-6.2.2204.ebuild @@ -0,0 +1,137 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{8..10} ) +inherit cmake desktop python-single-r1 xdg + +DESCRIPTION="Automatic 3d tetrahedral mesh generator" +HOMEPAGE="https://ngsolve.org/ https://github.com/NGSolve/netgen"; +SRC_URI="https://github.com/NGSolve/netgen/archive/refs/tags/v${PV}.tar.gz -> ${P}.tar.gz" + +SLOT="0" +LICENSE="LGPL-2.1" +KEYWORDS="~amd64 ~x86" + +IUSE="ffmpeg jpeg mpi opencascade python gui" +REQUIRED_USE=" + ${PYTHON_REQUIRED_USE} + ffmpeg? ( gui ) + jpeg? ( gui ) + python? ( gui ) +" + +DEPEND=" + sys-libs/zlib + ffmpeg? ( media-video/ffmpeg:= ) + gui? ( + dev-lang/tcl:0/8.6 + dev-lang/tk:0/8.6 + media-libs/glu + virtual/opengl + x11-libs/libX11 + x11-libs/libXmu + x11-libs/libxcb:= + ) + jpeg? ( media-libs/libjpeg-turbo:0= ) + mpi? ( + sci-libs/metis + virtual/mpi + ) + opencascade? ( sci-libs/opencascade:= ) + python? ( + ${PYTHON_DEPS} + $(python_gen_cond_dep ' + dev-python/pybind11[${PYTHON_USEDEP}] + ' + ) + mpi? ( + $(python_gen_cond_dep 'dev-python/mpi4py[${PYTHON_USEDEP}]' ) + ) + ) +" +RDEPEND="${DEPEND}" +BDEPEND=" + sys-apps/lsb-release + virtual/pkgconfig +" + +PATCHES=( + "${FILESDIR}/${P}-use-external-pybind11.patch" + "${FILESDIR}/${P}-find-Tk-include-directories.patch" + "${FILESDIR}/${P}-find-libjpeg-turbo-library.patch" + "${FILESDIR}/${P}-link-against-ffmpeg.patch" +) + +pkg_setup() { + use python && python-single-r1_pkg_setup +} + +src_prepare() { + # NOTE: need to manually check and update this string on version bumps! + cat <<- EOF > "${S}/version.txt" || die + v${PV}-0-gde0d706e + EOF + cmake_src_prepare +} + +src_configure() { + local mycmakeargs=( + # currently not working in a sandbox, expects netgen to be installed + # see https://github.com/NGSolve/netgen/issues/132 + -DBUILD_STUB_FILES=OFF + -DINSTALL_PROFILES=OFF + -DNG_INSTALL_DIR_CMAKE="$(get_libdir)/cmake/${PN}" + -DNG_INSTALL_DIR_INCLUDE="include/${PN}" + -DNG_INSTALL_DIR_LIB="$(get_libdir)" + -DUSE_CCACHE=OFF + # doesn't build with this version + -DUSE_CGNS=OFF + -DUSE_GUI="$(usex gui)" + -DUSE_INTERNAL_TCL=OFF + -DUSE_JPEG="$(usex jpeg)" + -DUSE_MPEG="$(usex ffmpeg)" + # respect users -march= choice + -DUSE_NATIVE_ARCH=OFF + -DUSE_MPI="$(usex mpi)" + -DUSE_OCC="$(usex opencascade)" + -DUSE_PYTHON="$(usex python)" + -DUSE_SUPERBUILD=OFF + ) + # no need to set this, if we only build the library + if use gui; then + mycmakeargs+=( -DTK_INCLUDE_PATH="/usr/$(get_libdir)/tk8.6/include" ) + fi + if use python; then + mycmakeargs+=( + -DPYBIND_INCLUDE_DIR="/usr/lib/${EPYTHON}/site-packages/pybind11/include/" + -DNG_INSTALL_PYBIND=OFF + ) + fi + if use mpi && use python; then + mycmakeargs+=( -DUSE_MPI4PY=ON ) + else + mycmakeargs+=( -DUSE_MPI4PY=OFF ) + fi + cmake_src_configure +} + +src_install() { + cmake_src_install + use python && python_optimize + + local NETGENDIR="/usr/share/${PN}" + echo -e "NETGENDIR=${NETGENDIR}" > ./99netgen || die + doenvd 99netgen + + if use gui; then + mv "${ED}"/usr/bin/{*.tcl,*.ocf} "${ED}${NETGENDIR}" || die + + doicon "${FILESDIR}"/${PN}.png + domenu "${FILESDIR}"/${PN}.desktop + fi + + mv "${ED}"/usr/share/${PN}/doc/ng4.pdf "${ED}"/usr/share/doc/${PF} || die + dosym -r /usr/share/doc/${PF}/ng4.pdf /usr/share/${PN}/doc/ng4.pdf +}
