commit: f853476e85be13cb1ac9f36e8fbb25ca5e12c464 Author: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> AuthorDate: Fri Feb 10 12:36:50 2023 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org> CommitDate: Fri Feb 10 12:36:50 2023 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f853476e
dev-python/snakemake: treeclean Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org> dev-python/snakemake/metadata.xml | 13 ------- dev-python/snakemake/snakemake-5.32.2.ebuild | 56 ---------------------------- profiles/package.mask | 1 - 3 files changed, 70 deletions(-) diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml deleted file mode 100644 index d9550c50f..000000000 --- a/dev-python/snakemake/metadata.xml +++ /dev/null @@ -1,13 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>mschu....@gmail.com</email> - <name>Michael Schubert</name> - </maintainer> - <upstream> - <remote-id type="bitbucket">johanneskoester/snakemake</remote-id> - <remote-id type="pypi">snakemake</remote-id> - <remote-id type="github">snakemake/snakemake</remote-id> - </upstream> -</pkgmetadata> diff --git a/dev-python/snakemake/snakemake-5.32.2.ebuild b/dev-python/snakemake/snakemake-5.32.2.ebuild deleted file mode 100644 index 59d2f061a..000000000 --- a/dev-python/snakemake/snakemake-5.32.2.ebuild +++ /dev/null @@ -1,56 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_{8..9} ) -DISTUTILS_USE_SETUPTOOLS=rdepend - -inherit distutils-r1 - -DESCRIPTION="Make-like task language" -HOMEPAGE="https://snakemake.readthedocs.io"; -SRC_URI="https://github.com/${PN}/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="MIT" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -# missing test dep google.cloud -RESTRICT="test" - -BDEPEND="test? ( - dev-python/requests-mock[${PYTHON_USEDEP}] - dev-python/google-api-python-client[${PYTHON_USEDEP}] - dev-python/jinja[${PYTHON_USEDEP}] - dev-python/networkx[${PYTHON_USEDEP}] - dev-python/pygments[${PYTHON_USEDEP}] - dev-python/pygraphviz[${PYTHON_USEDEP}] - dev-python/oauth2client[${PYTHON_USEDEP}] - net-libs/google-cloud-cpp -)" - -RDEPEND=" - dev-python/appdirs[${PYTHON_USEDEP}] - dev-python/ConfigArgParse[${PYTHON_USEDEP}] - dev-python/datrie[${PYTHON_USEDEP}] - dev-python/docutils[${PYTHON_USEDEP}] - dev-python/GitPython[${PYTHON_USEDEP}] - dev-python/jsonschema[${PYTHON_USEDEP}] - dev-python/nbformat[${PYTHON_USEDEP}] - dev-python/psutil[${PYTHON_USEDEP}] - dev-python/pyyaml[${PYTHON_USEDEP}] - dev-python/ratelimit[${PYTHON_USEDEP}] - dev-python/requests[${PYTHON_USEDEP}] - dev-python/toposort[${PYTHON_USEDEP}] - dev-python/wrapt[${PYTHON_USEDEP}] - sci-mathematics/pulp[${PYTHON_USEDEP}] -" - -distutils_enable_sphinx docs \ - dev-python/sphinxcontrib-napoleon \ - dev-python/sphinx-argparse \ - dev-python/sphinx_rtd_theme \ - dev-python/docutils \ - dev-python/recommonmark -distutils_enable_tests pytest diff --git a/profiles/package.mask b/profiles/package.mask index 57a0e78af..2ce61c946 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -34,7 +34,6 @@ # Needs bump of PYTHON_COMPAT to at least python3_10 sci-biology/gffutils sci-biology/chiron -dev-python/snakemake dev-python/kmapper # Reverse deps of above dev-python/ripser
