commit: 66a3f970a48bb2ea70095bbbeab801efd7c617a1 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Wed Jan 7 22:27:56 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Wed Jan 7 22:27:56 2015 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=66a3f970
bioperl/bioperl-1.6.901: dropped an ebuild with USE=+static, otherwise same in main tree --- sci-biology/bioperl/bioperl-1.6.901.ebuild | 81 ------------------------------ sci-biology/bioperl/metadata.xml | 5 -- 2 files changed, 86 deletions(-) diff --git a/sci-biology/bioperl/bioperl-1.6.901.ebuild b/sci-biology/bioperl/bioperl-1.6.901.ebuild deleted file mode 100644 index 98d0763..0000000 --- a/sci-biology/bioperl/bioperl-1.6.901.ebuild +++ /dev/null @@ -1,81 +0,0 @@ -# Copyright 1999-2009 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.1.ebuild,v 1.3 2009/10/02 14:51:51 weaver Exp $ - -EAPI="2" - -inherit perl-module - -SUBPROJECTS="+db +network +run" -MIN_PV="1.6" - -DESCRIPTION="Perl tools for bioinformatics - Core modules" -HOMEPAGE="http://www.bioperl.org/"; -# SRC_URI="http://www.bioperl.org/DIST/BioPerl-${PV}.tar.bz2"; -SRC_URI="http://www.cpan.org/authors/id/C/CJ/CJFIELDS/BioPerl-${PV}.tar.gz"; - -LICENSE="Artistic GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="-minimal graphviz sqlite ${SUBPROJECTS}" - -CDEPEND=">=perl-core/Module-Build-0.380.0 - dev-perl/Data-Stag - dev-perl/libwww-perl - !minimal? ( - dev-perl/Ace - dev-perl/Spreadsheet-ParseExcel - dev-perl/Spreadsheet-WriteExcel - >=dev-perl/XML-SAX-0.15 - dev-perl/Graph - dev-perl/SOAP-Lite - dev-perl/Array-Compare - dev-perl/SVG - dev-perl/XML-Simple - dev-perl/XML-Parser - dev-perl/XML-Twig - >=dev-perl/HTML-Parser-3.60 - >=dev-perl/XML-Writer-0.4 - dev-perl/Clone - dev-perl/XML-DOM - dev-perl/set-scalar - dev-perl/XML-XPath - dev-perl/XML-DOM-XPath - dev-perl/Algorithm-Munkres - dev-perl/Data-Stag - dev-perl/Math-Random - dev-perl/PostScript - dev-perl/Convert-Binary-C - dev-perl/SVG-Graph - dev-perl/IO-String - dev-perl/Class-Inspector - dev-perl/Sort-Naturally - ) - graphviz? ( dev-perl/GraphViz ) - sqlite? ( dev-perl/DBD-SQLite )" -DEPEND="virtual/perl-Module-Build - ${CDEPEND}" -# In perl-overlay -# >=virtual/perl-ExtUtils-Manifest-1.52 (to CDEPEND?) -# >=perl-CPAN/perl-CPAN-1.81 -RDEPEND="${CDEPEND}" -PDEPEND="!minimal? ( dev-perl/Bio-ASN1-EntrezGene ) - db? ( >=sci-biology/bioperl-db-${MIN_PV} ) - network? ( >=sci-biology/bioperl-network-${MIN_PV} ) - run? ( >=sci-biology/bioperl-run-${MIN_PV} )" - -S="${WORKDIR}/BioPerl-${PV}" - -src_configure() { - sed -i -e '/add_post_install_script.*symlink_script.pl/d' \ - -e "/'CPAN' *=> *1.81/d" \ - -e "/'ExtUtils::Manifest' *=> *'1.52'/d" "${S}/Build.PL" || die - - if use minimal && use graphviz; then die "USE flags minimal and graphviz cannot be used together"; fi - perl-module_src_configure -} - -src_install() { - mydoc="AUTHORS BUGS FAQ" - perl-module_src_install -} diff --git a/sci-biology/bioperl/metadata.xml b/sci-biology/bioperl/metadata.xml deleted file mode 100644 index d464821..0000000 --- a/sci-biology/bioperl/metadata.xml +++ /dev/null @@ -1,5 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <herd>sci-biology</herd> -</pkgmetadata>
