commit: 3348aa6294b4e7ef88327026db0f601c646c95b0 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Wed Jan 7 22:42:20 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Wed Jan 7 22:42:20 2015 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=3348aa62
Initial ebuild --- sci-biology/trans-abyss/ChangeLog | 10 ++++++++++ sci-biology/trans-abyss/metadata.xml | 9 +++++++++ sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild | 24 ++++++++++++++++++++++++ 3 files changed, 43 insertions(+) diff --git a/sci-biology/trans-abyss/ChangeLog b/sci-biology/trans-abyss/ChangeLog new file mode 100644 index 0000000..47ce379 --- /dev/null +++ b/sci-biology/trans-abyss/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/trans-abyss +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*trans-abyss-1.4.8 (07 Jan 2015) + + 07 Jan 2015; Martin Mokrejs <[email protected]> + +trans-abyss-1.4.8.ebuild, +metadata.xml: + initial ebuild + diff --git a/sci-biology/trans-abyss/metadata.xml b/sci-biology/trans-abyss/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/trans-abyss/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild b/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild new file mode 100644 index 0000000..c8538cb --- /dev/null +++ b/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild @@ -0,0 +1,24 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Analyze and combine multiple assemblies from abyss" +HOMEPAGE="http://www.bcgsc.ca/platform/bioinfo/software/trans-abyss"; +SRC_URI="http://www.bcgsc.ca/platform/bioinfo/software/trans-abyss/releases/"${PV}"/trans-ABySS-v"${PV}"_20130916.tar.gz"; + +LICENSE="" +SLOT="0" +KEYWORDS="" +IUSE="" + +# perl and python +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/trans-ABySS-v"${PV}" + +# TODO +#src_install(){ +#}
