commit: 5742accf45fcfa12220b7ff21f6b633f0423ed04
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Fri Jan 9 15:29:10 2015 +0000
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Fri Jan 9 15:29:10 2015 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5742accf
sci-biology/wcd: version bump, clarify package description, add comments about
addons
Package-Manager: portage-2.2.7
---
sci-biology/wcd/ChangeLog | 10 ++++++++--
sci-biology/wcd/{wcd-0.6.0.ebuild => wcd-0.6.3.ebuild} | 12 +++++++++---
2 files changed, 17 insertions(+), 5 deletions(-)
diff --git a/sci-biology/wcd/ChangeLog b/sci-biology/wcd/ChangeLog
index be44eea..359dd42 100644
--- a/sci-biology/wcd/ChangeLog
+++ b/sci-biology/wcd/ChangeLog
@@ -1,7 +1,14 @@
# ChangeLog for sci-biology/wcd
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
# $Header: $
+*wcd-0.6.3 (09 Jan 2015)
+
+ 09 Jan 2015; Martin Mokrejs <[email protected]> +wcd-0.6.3.ebuild,
+ -wcd-0.6.0.ebuild:
+ sci-biology/wcd: version bump, clarify package description, add comments
about
+ addons
+
03 Mar 2013; Justin Lecher <[email protected]> wcd-0.6.0.ebuild,
+files/wcd-0.6.0-impl-decl.patch, +files/wcd-0.6.0-ldflags.patch,
metadata.xml:
@@ -13,4 +20,3 @@
25 Jun 2011; Justin Lecher <[email protected]> -wcd-0.6.0_beta.ebuild,
+wcd-0.6.0.ebuild:
Cleaned ebuild
-
diff --git a/sci-biology/wcd/wcd-0.6.0.ebuild b/sci-biology/wcd/wcd-0.6.3.ebuild
similarity index 63%
rename from sci-biology/wcd/wcd-0.6.0.ebuild
rename to sci-biology/wcd/wcd-0.6.3.ebuild
index eb906dc..87c5c51 100644
--- a/sci-biology/wcd/wcd-0.6.0.ebuild
+++ b/sci-biology/wcd/wcd-0.6.3.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
@@ -8,9 +8,9 @@ AUTOTOOLS_AUTORECONF=true
inherit autotools-utils flag-o-matic multilib
-DESCRIPTION="Sequence clustering by either of: d2 function, edit distance,
common word heuristics"
+DESCRIPTION="EST sequence clustering by either of: d2 function, edit distance,
common word heuristics"
HOMEPAGE="http://code.google.com/p/wcdest/";
-SRC_URI="http://wcdest.googlecode.com/files/${P}B.tar.gz -> ${P}.tar.gz"
+SRC_URI="http://wcdest.googlecode.com/files/wcd-express-${PV}.tar.gz ->
${P}.tar.gz"
LICENSE="GPL-2"
SLOT="0"
@@ -43,3 +43,9 @@ src_install() {
use doc && HTML_DOCS=( doc/wcd.html doc/wcd.pdf doc/wcd.texi )
autotools-utils_src_install PREFIX=/usr LIBDIR="${D}"usr/$(get_libdir)
}
+
+# consider providing the EMBOSS wrapper for wcd
+#
https://code.google.com/p/wcdest/downloads/detail?name=wcd_emboss_wrap_001.tar.gz
+
+# also consider ESTsim
+#
https://code.google.com/p/wcdest/downloads/detail?name=estsim_distrib.tar.gz&can=2&q=
