commit: 40a7e817c3ade89d662b4947398a61c24ac25139
Author: Michał Górny <mgorny <AT> gentoo <DOT> org>
AuthorDate: Thu Sep 28 16:14:00 2023 +0000
Commit: Michał Górny <mgorny <AT> gentoo <DOT> org>
CommitDate: Thu Sep 28 16:43:13 2023 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=40a7e817
dev-python/scipy: Bump to 1.11.3
Signed-off-by: Michał Górny <mgorny <AT> gentoo.org>
dev-python/scipy/Manifest | 1 +
dev-python/scipy/scipy-1.11.3.ebuild | 129 +++++++++++++++++++++++++++++++++++
2 files changed, 130 insertions(+)
diff --git a/dev-python/scipy/Manifest b/dev-python/scipy/Manifest
index 4d500aaa007e..85dd8b3c9e2d 100644
--- a/dev-python/scipy/Manifest
+++ b/dev-python/scipy/Manifest
@@ -2,5 +2,6 @@ DIST scipy-1.10.1.tar.gz 42407997 BLAKE2B
807dceb1e056a1a2c0ec354e4e21f64e59cdab
DIST scipy-1.11.0.tar.gz 56030121 BLAKE2B
e700bf8f9cffa7bc0f4832722010dcf2e03d8f93d13534f7f85734394c02536c1427cae5a097b59616f0873ba941579fcf2efd0baafc2037d9eca1f93362d38b
SHA512
248cfbbedba73925b0461bf0f96c4a11bd4cfc7849cb18c58f6405074796ab0efdc4f056c58d344cb8833c0d2c6425f84e7ac6fe958cf98b1cc0bf16e7ff2444
DIST scipy-1.11.1.tar.gz 56031509 BLAKE2B
456a80103f8c31c456f80e06b25d765f7ad5655dbdd49e99f476e78273f4291c578a8e99fda3f3a1e848c0e75e08629a09a8146b4a798e85edcaffb7ed1d34a9
SHA512
2859fc73c4fef713497f450b76a57d274bb46477a08ac909714823225f065a13c1e42a61ce67575cfc475e1e4612090cc4ca0920411fe32370c5b5c476352f97
DIST scipy-1.11.2.tar.gz 56045065 BLAKE2B
c92a27ef7b560c17bea7dbbc5ca7e192cc7ee8297b65887c3bad50509cca0f83314b688e8c9ef14228c7891e4c16e9d45920de7cb39a0456c7712ae752839203
SHA512
f6902d48617827d01f69c057f3c4790c7388bc58df0791ade96e073740253bc0529475f9fc22d00c23c0b649acaeb820792528d3805d0ac68588c329aa87b3f2
+DIST scipy-1.11.3.tar.gz 56335652 BLAKE2B
2b35c24522b2bd498b4ebe84a854c8ec1e62917e7b899b3e3526abb9780c1e56f8e776a3bb1eab1bedb17a273fac881e5ffdaac808084a4f5a5f97428bff1029
SHA512
6491c4e479d9f4f02e677396a25ddca947a0dc6c009fc2ec34c658012a6224c0b535f14045bb011fbde9973ea987d184574ed64e6760c31798ec860eb0896fcf
DIST scipy-html-1.10.1.zip 49191107 BLAKE2B
5163ae3a62745992bcf94ab02ca2bb13fcf6d2ae0eb2a113ba29bc37a8e8f40ec70e39fe16e6371ce0bc31d4c8f0f46746be91b4fe2ad41c68a985c6f00fb8e7
SHA512
f3252452d3bfd400890f29460de2f97bf72732e0fc864582e906b78808e856ead5b1bf97cba531f2150e396408e585499d127004231421d20108e96040316232
DIST scipy-html-1.11.0.zip 50421508 BLAKE2B
cb5e4a4f8817a80f54ae73b4a47ba22d2438df46ebfe27ef5fdc2695fdd983226f4ccae925bf82b15d01ced4f4b6807384ecadac5e1aa7700aa887ad06b7d065
SHA512
33718bbd5e828687d93fccc441a53b6a2e8f54ac4952d3b69d4c4668f55cb6ef5aba33df9acda20b2400effa5ae71767b2a5602a365ad2045a6edd24ff89c253
diff --git a/dev-python/scipy/scipy-1.11.3.ebuild
b/dev-python/scipy/scipy-1.11.3.ebuild
new file mode 100644
index 000000000000..7dc5558d9dc2
--- /dev/null
+++ b/dev-python/scipy/scipy-1.11.3.ebuild
@@ -0,0 +1,129 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+FORTRAN_NEEDED=fortran
+DISTUTILS_EXT=1
+DISTUTILS_USE_PEP517=meson-python
+PYTHON_COMPAT=( python3_{10..11} )
+PYTHON_REQ_USE="threads(+)"
+
+inherit fortran-2 distutils-r1 multiprocessing
+
+DESCRIPTION="Scientific algorithms library for Python"
+HOMEPAGE="
+ https://scipy.org/
+ https://github.com/scipy/scipy/
+ https://pypi.org/project/scipy/
+"
+
+if [[ ${PV} == *9999* ]] ; then
+ inherit git-r3
+
+ # Need submodules, so git for now.
+ EGIT_REPO_URI="https://github.com/scipy/scipy";
+ EGIT_BRANCH="maintenance/$(ver_cut 1-2).x"
+ EGIT_SUBMODULES=( '*' )
+else
+ inherit pypi
+
+ # Upstream is often behind with doc updates
+ #DOC_PV=${PV}
+ DOC_PV=1.11.0
+
+ SRC_URI+="
+ doc? (
+
https://docs.scipy.org/doc/${PN}-${DOC_PV}/${PN}-html-${DOC_PV}.zip
+ )"
+
+ if [[ ${PV} != *rc* ]] ; then
+ KEYWORDS="~amd64 ~arm ~arm64 -hppa ~ia64 ~loong ~ppc ~ppc64
~riscv ~s390 ~sparc ~x86 ~arm64-macos ~x64-macos"
+ fi
+fi
+
+LICENSE="BSD LGPL-2"
+SLOT="0"
+IUSE="doc +fortran test-rust"
+
+# umfpack is technically optional but it's preferred to have it available.
+DEPEND="
+ >=dev-python/numpy-1.21.6[lapack,${PYTHON_USEDEP}]
+ sci-libs/arpack:=
+ sci-libs/umfpack
+ virtual/cblas
+ >=virtual/lapack-3.8
+"
+RDEPEND="
+ ${DEPEND}
+ dev-python/pillow[${PYTHON_USEDEP}]
+"
+BDEPEND="
+ dev-lang/swig
+ >=dev-python/cython-0.29.35[${PYTHON_USEDEP}]
+ >=dev-python/meson-python-0.12.1[${PYTHON_USEDEP}]
+ >=dev-python/pybind11-2.10.4[${PYTHON_USEDEP}]
+ >=dev-util/meson-1.1.0
+ !kernel_Darwin? ( dev-util/patchelf )
+ virtual/pkgconfig
+ doc? ( app-arch/unzip )
+ fortran? ( dev-python/pythran[${PYTHON_USEDEP}] )
+ test? (
+ dev-python/pytest-xdist[${PYTHON_USEDEP}]
+ )
+ test-rust? (
+ dev-python/pooch[${PYTHON_USEDEP}]
+ )
+"
+
+distutils_enable_tests pytest
+
+src_unpack() {
+ default
+
+ if use doc; then
+ unzip -qo "${DISTDIR}"/${PN}-html-${DOC_PV}.zip -d html || die
+ fi
+}
+
+python_configure_all() {
+ DISTUTILS_ARGS=(
+ -Dblas=blas
+ -Dlapack=lapack
+ -Duse-pythran=$(usex fortran true false)
+ )
+}
+
+python_test() {
+ cd "${BUILD_DIR}/install$(python_get_sitedir)" || die
+
+ local EPYTEST_DESELECT=(
+ # Network
+
scipy/datasets/tests/test_data.py::TestDatasets::test_existence_all
+ scipy/datasets/tests/test_data.py::TestDatasets::test_ascent
+ scipy/datasets/tests/test_data.py::TestDatasets::test_face
+
scipy/datasets/tests/test_data.py::TestDatasets::test_electrocardiogram
+
+ # Precision issue with diff. blas?
+
scipy/optimize/tests/test__basinhopping.py::Test_Metropolis::test_gh7799
+
+ # Crashes with assertion, not a regression
+ # https://github.com/scipy/scipy/issues/19321
+ scipy/signal/tests/test_signaltools.py::test_lfilter_bad_object
+ )
+ local EPYTEST_IGNORE=()
+
+ if ! has_version -b "dev-python/pooch[${PYTHON_USEDEP}]" ; then
+ EPYTEST_IGNORE+=(
+ scipy/datasets/tests/test_data.py
+ )
+ fi
+
+ epytest -n "$(makeopts_jobs)" --dist=worksteal scipy
+}
+
+python_install_all() {
+ use doc && local HTML_DOCS=( "${WORKDIR}"/html/. )
+
+ distutils-r1_python_install_all
+}
