commit: 1ed8090c989cf72046e206e4daaf02222c4029a5 Author: Christoph Junghans <ottxor <AT> gentoo <DOT> org> AuthorDate: Thu Jan 15 15:56:39 2015 +0000 Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org> CommitDate: Thu Jan 15 15:56:39 2015 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=1ed8090c
Revert "sci-biology/bcftools: new package: compiles against bundled sci-libs/htslib-1.1 but does not install it" Missing license. This reverts commit 46558c3fddec519dc1b598612c6aadd022dc2aab. --- sci-biology/bcftools/ChangeLog | 10 ---------- sci-biology/bcftools/bcftools-1.1.ebuild | 26 -------------------------- sci-biology/bcftools/metadata.xml | 9 --------- 3 files changed, 45 deletions(-) diff --git a/sci-biology/bcftools/ChangeLog b/sci-biology/bcftools/ChangeLog deleted file mode 100644 index 4e0a781..0000000 --- a/sci-biology/bcftools/ChangeLog +++ /dev/null @@ -1,10 +0,0 @@ -# ChangeLog for sci-biology/bcftools -# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - -*bcftools-1.1 (14 Jan 2015) - - 14 Jan 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> - +bcftools-1.1.ebuild, +metadata.xml: - sci-biology/bcftools: new package: compiles against bundled sci- - libs/htslib-1.1 but does not install it diff --git a/sci-biology/bcftools/bcftools-1.1.ebuild b/sci-biology/bcftools/bcftools-1.1.ebuild deleted file mode 100644 index e3f446f..0000000 --- a/sci-biology/bcftools/bcftools-1.1.ebuild +++ /dev/null @@ -1,26 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=5 - -DESCRIPTION="Utilities for variant calling and manipulating VCF and BCF files" -HOMEPAGE="http://www.htslib.org/bcftools_release_notes"; -SRC_URI="http://sourceforge.net/projects/samtools/files/samtools/1.1/bcftools-1.1.tar.bz2"; - -LICENSE="MIT-GRL" -SLOT="0" -KEYWORDS="~amd64" -IUSE="" - -DEPEND="sci-libs/htslib - dev-lang/perl" -RDEPEND="${DEPEND}" - -src_prepare(){ - sed -e 's#prefix = /usr/local#prefix = /usr#' \ - -e 's@CFLAGS = -g -Wall -Wc++-compat -O2@#CFLAGS = -g -Wall -Wc++-compat -O2@' -i Makefile - - sed -e 's#prefix = /usr/local#prefix = /usr#' \ - -e 's@CFLAGS = -g -Wall -Wc++-compat -O2@#CFLAGS = -g -Wall -Wc++-compat -O2@' -i htslib-1.1/Makefile -} diff --git a/sci-biology/bcftools/metadata.xml b/sci-biology/bcftools/metadata.xml deleted file mode 100644 index 2bc8930..0000000 --- a/sci-biology/bcftools/metadata.xml +++ /dev/null @@ -1,9 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <herd>sci-biology</herd> - <maintainer> - <email>mmokr...@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> -</pkgmetadata>
