commit: a9b2100efac435eb6fc2140c1a906d0a2758984a
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Mon Jan 22 19:28:18 2024 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Mon Jan 22 19:28:18 2024 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a9b2100e
sci-biology/SPAdes: drop 3.15.3
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-biology/SPAdes/SPAdes-3.15.3.ebuild | 38 ---------------------------------
1 file changed, 38 deletions(-)
diff --git a/sci-biology/SPAdes/SPAdes-3.15.3.ebuild
b/sci-biology/SPAdes/SPAdes-3.15.3.ebuild
deleted file mode 100644
index b6d344c37..000000000
--- a/sci-biology/SPAdes/SPAdes-3.15.3.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-PYTHON_COMPAT=( python3_{10..12} )
-inherit python-single-r1
-
-DESCRIPTION="De novo de Bruijn genome assembler overcoming uneven coverage"
-HOMEPAGE="https://cab.spbu.ru/software/spades";
-SRC_URI="
- https://github.com/ablab/spades/releases/download/v${PV}/${P}.tar.gz
- https://cab.spbu.ru/files/release${PV}/manual.html -> ${P}_manual.html
- https://cab.spbu.ru/files/release${PV}/rnaspades_manual.html ->
${P}_rnaspades_manual.html
- https://cab.spbu.ru/files/release${PV}/truspades_manual.html ->
${P}_truspades_manual.html
-"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS=""
-# Fails to build:
-# https://github.com/ablab/spades/issues/1238
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="
- sys-libs/zlib
- app-arch/bzip2
- dev-python/regex
- ${PYTHON_DEPS}
-"
-RDEPEND="${DEPEND}"
-BDEPEND="dev-build/cmake"
-
-src_install(){
- einstalldocs
- # WORKAROUND: This script does both compile and install in one go
- PREFIX="${ED}"/usr ./spades_compile.sh || die
-}
