commit:     25fafdd5d2ff7fccce1eec17b989ea62aa84d680
Author:     mschubertv <mschu.dev <AT> gmail <DOT> com>
AuthorDate: Tue Dec 19 10:34:33 2023 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Jan 30 13:58:21 2024 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=25fafdd5

sci-biology/fastp: add ebuild

Signed-off-by: Michael Schubert <mschu.dev <AT> gmail.com>
Closes: https://github.com/gentoo/sci/pull/1225
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 sci-biology/fastp/fastp-0.23.4.ebuild | 20 ++++++++++++++++++++
 sci-biology/fastp/metadata.xml        | 11 +++++++++++
 2 files changed, 31 insertions(+)

diff --git a/sci-biology/fastp/fastp-0.23.4.ebuild 
b/sci-biology/fastp/fastp-0.23.4.ebuild
new file mode 100644
index 000000000..70d5ce330
--- /dev/null
+++ b/sci-biology/fastp/fastp-0.23.4.ebuild
@@ -0,0 +1,20 @@
+# Copyright 1999-2023 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+DESCRIPTION="An ultra-fast all-in-one FASTQ preprocessor"
+HOMEPAGE="https://github.com/OpenGene/fastp";
+SRC_URI="https://github.com/OpenGene/fastp/archive/refs/tags/v${PV}.tar.gz -> 
${P}.tar.gz"
+KEYWORDS="~amd64"
+
+LICENSE="MIT"
+SLOT="0"
+
+DEPEND="app-arch/libdeflate
+       dev-libs/isa-l"
+
+src_install() {
+       dodir /usr/bin
+       emake PREFIX="${ED}"/usr install
+}

diff --git a/sci-biology/fastp/metadata.xml b/sci-biology/fastp/metadata.xml
new file mode 100644
index 000000000..d51d87c5a
--- /dev/null
+++ b/sci-biology/fastp/metadata.xml
@@ -0,0 +1,11 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";>
+<pkgmetadata>
+       <maintainer type="person">
+               <email>[email protected]</email>
+               <name>Michael Schubert</name>
+       </maintainer>
+       <upstream>
+               <remote-id type="github">OpenGene/fastp</remote-id>
+       </upstream>
+</pkgmetadata>

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