commit: c7d8b5cfc238fb087eca8b22ca04e1b70aa93c5a Author: Arthur Zamarin <arthurzam <AT> gentoo <DOT> org> AuthorDate: Fri Jul 26 15:11:12 2024 +0000 Commit: Arthur Zamarin <arthurzam <AT> gentoo <DOT> org> CommitDate: Fri Jul 26 15:16:22 2024 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c7d8b5cf
sci-libs/h5hut: treeclean Closes: https://bugs.gentoo.org/934689 (pkgremoved) Closes: https://bugs.gentoo.org/862714 (pkgremoved) Closes: https://bugs.gentoo.org/849920 (pkgremoved) Closes: https://bugs.gentoo.org/832789 (pkgremoved) Closes: https://bugs.gentoo.org/828579 (pkgremoved) Closes: https://bugs.gentoo.org/741440 (pkgremoved) Signed-off-by: Arthur Zamarin <arthurzam <AT> gentoo.org> profiles/package.mask | 6 -- sci-libs/h5hut/Manifest | 1 - sci-libs/h5hut/files/h5hut-1.99.13-autotools.patch | 77 ---------------------- sci-libs/h5hut/files/h5hut-1.99.13-mpio.patch | 12 ---- sci-libs/h5hut/h5hut-1.99.13-r1.ebuild | 40 ----------- sci-libs/h5hut/metadata.xml | 8 --- 6 files changed, 144 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index bebaaa225c25..b5ad4e0161a6 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -219,12 +219,6 @@ games-puzzle/seatris # Bugs #871387, #907261, #712480, #931765. media-libs/libmpeg3 -# Arthur Zamarin <[email protected]> (2024-06-22) -# EAPI=6, no reverse-dependencies, various issues with modern C, -# installs libtools files. -# Removal on 2024-07-22. Bugs #934689, #741440, #849920, #832789, #862714, #828579. -sci-libs/h5hut - # Arthur Zamarin <[email protected]> (2024-06-22) # EAPI=6, failing tests, fails to compile in various envs, various # QA issues. diff --git a/sci-libs/h5hut/Manifest b/sci-libs/h5hut/Manifest deleted file mode 100644 index 63e2e43f3f1f..000000000000 --- a/sci-libs/h5hut/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST H5hut-1.99.13.tar.gz 3029357 BLAKE2B 555d1f89ff60fbd72763026643ae76d5f68bb9d76bfd2fb29d846e3c777184db3be1bae98763ae683e72566e2624678118eea0da8d0bc1e57b84fd0b4777abe7 SHA512 c2590795c45ecf5e642308f5b36c4e573fdcbb6e985f5867c13fd9e1f0ddd9b48fbc423ad0165b8f047256e42a1eb54d508c9322a593bcfad3a2769547d2887a diff --git a/sci-libs/h5hut/files/h5hut-1.99.13-autotools.patch b/sci-libs/h5hut/files/h5hut-1.99.13-autotools.patch deleted file mode 100644 index 262aa61461a3..000000000000 --- a/sci-libs/h5hut/files/h5hut-1.99.13-autotools.patch +++ /dev/null @@ -1,77 +0,0 @@ -diff -Naur H5hut-1.99.13.orig/src/Fortran/Makefile.am H5hut-1.99.13/src/Fortran/Makefile.am ---- H5hut-1.99.13.orig/src/Fortran/Makefile.am 2017-07-02 16:46:44.899690038 -0600 -+++ H5hut-1.99.13/src/Fortran/Makefile.am 2017-07-02 16:53:46.414587073 -0600 -@@ -49,9 +49,6 @@ - awk '/INTEGER\*8 :: /{print "\t" $$0}' $^ >$@ - awk '/PARAMETER /{print "\t" $$0}' $^ >> $@ - awk '/INTEGER\*8 FUNCTION/{print "\t" $$1 " " $$3}' $^ >>$@ -- --all-local: $(top_srcdir)/src/include/H5hutF.h -- $(INSTALL) -m644 .libs/libH5hutF.a $(top_srcdir)/src/lib - endif - - clean: clean-am -diff -Naur H5hut-1.99.13.orig/src/h5core/Makefile.am H5hut-1.99.13/src/h5core/Makefile.am ---- H5hut-1.99.13.orig/src/h5core/Makefile.am 2017-07-02 16:46:44.899690038 -0600 -+++ H5hut-1.99.13/src/h5core/Makefile.am 2017-07-02 16:58:03.017839542 -0600 -@@ -89,15 +89,10 @@ - - libH5hut_la_LDFLAGS = -version-info 2:0:0 - --all-local: -- $(INSTALL) -m0755 -d $(top_builddir)/src/lib -- $(INSTALL) -m644 .libs/libH5hut.a $(top_builddir)/src/lib -- - install-exec-local: - @$(INSTALL) -d $(DESTDIR)$(includedir)/h5core - @$(INSTALL) -m644 $(top_srcdir)/src/include/h5core/*.h $(DESTDIR)$(includedir)/h5core/ - - clean-local: -- $(RM) -f $(top_srcdir)/src/lib/libH5hut.* - $(RM) -f *~ - -diff -Naur H5hut-1.99.13.orig/test/Makefile.am H5hut-1.99.13/test/Makefile.am ---- H5hut-1.99.13.orig/test/Makefile.am 2017-07-02 16:46:44.919690283 -0600 -+++ H5hut-1.99.13/test/Makefile.am 2017-07-02 16:58:01.297818301 -0600 -@@ -1,10 +1,9 @@ - # test level Makefile.am - - AM_CPPFLAGS += -I$(top_srcdir)/src/include --AM_LDFLAGS += -L${abs_top_builddir}/src/lib - - LDADD = --LDADD += -lH5hut -+LDADD += ../src/h5core/libH5hut.la - - noinst_PROGRAMS = - -diff -Naur H5hut-1.99.13.orig/tools/Makefile.am H5hut-1.99.13/tools/Makefile.am ---- H5hut-1.99.13.orig/tools/Makefile.am 2017-07-02 16:46:44.919690283 -0600 -+++ H5hut-1.99.13/tools/Makefile.am 2017-07-02 16:59:30.228916458 -0600 -@@ -8,10 +8,9 @@ - - AM_CPPFLAGS += -I${abs_top_builddir}/src/include -Wno-deprecated - FFLAGS += -cpp $(AM_CPPFLAGS) --AM_LDFLAGS += -L${abs_top_builddir}/src/lib - - LDADD = --LDADD += -lH5hut -+LDADD += ../src/h5core/libH5hut.la - - if ENABLE_C - EXTRA_SCRIPTS = # h5hutcc -diff -Naur H5hut-1.99.13.orig/tools/vtk2h5grid/Makefile.am H5hut-1.99.13/tools/vtk2h5grid/Makefile.am ---- H5hut-1.99.13.orig/tools/vtk2h5grid/Makefile.am 2017-07-02 16:46:44.919690283 -0600 -+++ H5hut-1.99.13/tools/vtk2h5grid/Makefile.am 2017-07-02 16:58:58.978530564 -0600 -@@ -1,10 +1,9 @@ - AM_CPPFLAGS = -I${abs_top_srcdir}/src/include -Wno-deprecated - FFLAGS += -cpp $(AM_CPPFLAGS) --LDFLAGS += -L${abs_top_builddir}/src/lib - - LDADD = - --LDADD += -lH5hut -lvtkIO -lvtkFiltering -lvtkCommon -lvtksys -lpthread -ldl -+LDADD += ../src/h5core/libH5hut.la -lvtkIO -lvtkFiltering -lvtkCommon -lvtksys -lpthread -ldl - - - bin_PROGRAMS = diff --git a/sci-libs/h5hut/files/h5hut-1.99.13-mpio.patch b/sci-libs/h5hut/files/h5hut-1.99.13-mpio.patch deleted file mode 100644 index a94c8e59000f..000000000000 --- a/sci-libs/h5hut/files/h5hut-1.99.13-mpio.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -Naur H5hut-1.99.13.orig/src/h5core/h5_hdf5_private.h H5hut-1.99.13/src/h5core/h5_hdf5_private.h ---- H5hut-1.99.13.orig/src/h5core/h5_hdf5_private.h 2017-07-02 16:46:44.899690038 -0600 -+++ H5hut-1.99.13/src/h5core/h5_hdf5_private.h 2017-07-02 16:47:16.550080867 -0600 -@@ -934,7 +934,7 @@ - HDF5_WRAPPER_ENTER (h5_err_t, - "fapl_id=%d, comm=..., use_gpfs=%d", - fapl_id, (int)use_gpfs); -- if ( H5Pset_fapl_mpiposix (fapl_id, comm, use_gpfs) < 0) -+ if ( H5Pset_fapl_mpio (fapl_id, comm, use_gpfs) < 0) - HDF5_WRAPPER_LEAVE ( - h5_error ( - H5_ERR_HDF5, diff --git a/sci-libs/h5hut/h5hut-1.99.13-r1.ebuild b/sci-libs/h5hut/h5hut-1.99.13-r1.ebuild deleted file mode 100644 index 8401f6468846..000000000000 --- a/sci-libs/h5hut/h5hut-1.99.13-r1.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit autotools - -MY_P="${P^h}" -DESCRIPTION="High-Performance I/O Library for Particle-based Simulations" -HOMEPAGE="http://www-vis.lbl.gov/Research/H5hut/"; -SRC_URI="https://amas.psi.ch/H5hut/raw-attachment/wiki/DownloadSources/${MY_P}.tar.gz"; - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -# < dep on hdf5 because of bug #809221 -# Needs a proper fix. -DEPEND=" - virtual/mpi - <sci-libs/hdf5-1.12[mpi] - " -RDEPEND="${DEPEND}" - -PATCHES=( - "${FILESDIR}/${P}-mpio.patch" - "${FILESDIR}/${P}-autotools.patch" - ) - -S="${WORKDIR}/${MY_P}" - -src_prepare() { - default - eautoreconf -} - -src_configure() { - econf --enable-parallel --enable-shared --disable-static CC=mpicc CXX=mpicxx -} diff --git a/sci-libs/h5hut/metadata.xml b/sci-libs/h5hut/metadata.xml deleted file mode 100644 index c0cd18916a93..000000000000 --- a/sci-libs/h5hut/metadata.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Science Project</name> - </maintainer> -</pkgmetadata>
