commit: d45ebd290331cc672bded1ce4d9876a6b0505323
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Wed Feb 18 13:55:27 2015 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Wed Feb 18 13:55:27 2015 +0000
URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d45ebd29
Add symlink
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
---
sci-biology/tablet/tablet-1.14.04.10.ebuild | 52 +----------------------------
1 file changed, 1 insertion(+), 51 deletions(-)
diff --git a/sci-biology/tablet/tablet-1.14.04.10.ebuild
b/sci-biology/tablet/tablet-1.14.04.10.ebuild
deleted file mode 100644
index 1940cb9..0000000
--- a/sci-biology/tablet/tablet-1.14.04.10.ebuild
+++ /dev/null
@@ -1,51 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=5
-
-PYTHON_COMPAT=( python{2_6,2_7} )
-
-inherit java-pkg-2 java-ant-2 python-r1
-
-# [ "$PV" == "9999" ] && inherit subversion
-inherit subversion
-
-DESCRIPTION="Viewer of next generation sequence assemblies and alignments."
-HOMEPAGE="http://bioinf.scri.ac.uk/tablet/";
-if [ "$PV" == "9999" ]; then
- ESVN_REPO_URI="http://ics.hutton.ac.uk/svn/tablet/trunk/";
- KEYWORDS=""
-else
- ESVN_REPO_URI="http://ics.hutton.ac.uk/svn/tablet/tags/${PV}";
- KEYWORDS=""
-fi
-
-LICENSE="Tablet"
-SLOT="0"
-IUSE=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="${PYTHON_DEPS}
- >=virtual/jdk-1.7"
-RDEPEND="${DEPEND}
- >=virtual/jre-1.7
- sci-biology/samtools
- sci-biology/picard
- dev-db/sqlite"
-
-S="${WORKDIR}"
-
-src_install() {
- java-pkg_dojar lib/tablet-resources.jar || die
- java-pkg_dojar lib/tablet.jar || die
- java-pkg_dojar lib/flamingo.jar || die
- java-pkg_dojar lib/scri-commons.jar || die
- java-pkg_dojar lib/samtools*.jar || die
-
- dobin www/additional/coveragestats.py
-
- echo "PATH=${EPREFIX}/opt/Tablet" > 99Tablet
- doenvd 99Tablet || die
-}
diff --git a/sci-biology/tablet/tablet-1.14.04.10.ebuild
b/sci-biology/tablet/tablet-1.14.04.10.ebuild
new file mode 120000
index 0000000..a170f54
--- /dev/null
+++ b/sci-biology/tablet/tablet-1.14.04.10.ebuild
@@ -0,0 +1 @@
+tablet-9999.ebuild
\ No newline at end of file
