I usually load both blas-atlas and lapack-atlas, even though I don't
currently run anything that uses lapack. R uses only blas-atlas.

Darren Dale wrote:

>Hi Ed,
>
>On Saturday 30 April 2005 03:07 pm, M. Edward (Ed) Borasky wrote:
>  
>
>>Speaking of Atlas, I recently did some beta-testing on R 2.1 and found
>>some minor numerical issues on my Athlon Thunderbird in the Atlas 3.6.0
>>libraries built by Gentoo ebuilds. These weren't ghastly problems --
>>just a low-end bit or two in some linear regressions -- but they were
>>enough to trigger some rather sensitive error tests in the R test suite.
>>The tests were in fact so sensitive that the R developers made them more
>>lenient as a result of my bug reports. :)
>>
>>The interesting thing, though, is that I was the *only* tester that
>>reported these issues, and that they went away when I built Atlas, both
>>3.6.0 and the latest, 3.7.8, directly from source, rather than from the
>>ebuild, and used the hand-built version in building R.
>>    
>>
>
>Which atlas ebuild were you using? I use the lapack-atlas and blas-atlas 
>ebuilds, and I built scipy from source. The scipy tests passed, but maybe 
>they are less sensitive.
>
>  
>
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