Hi all, I am trying to install EIGENSOFT version 2.0 BETA (http://genepath.med.harvard.edu/~reich/Software.htm). The software comes with binairies, fair enough. That's the easy part.
Running one of the program "smartpca" it will say : $ ./smartpca ./smartpca: error while loading shared libraries: liblapack.so.3: cannot open shared object file: No such file or directory So I installed lapack-atlas (3.8) that actually install liblapack.so.0 and much more. emerge lapack-atlas Looking at the folders, I can see liblapack.so.0, like so: # ls -lh /usr/lib/liblap* lrwxrwxrwx 1 root root 24 Jan 23 16:09 /usr/lib/liblapack.a -> lapack/atlas/liblapack.a lrwxrwxrwx 1 root root 25 Jan 23 16:09 /usr/lib/liblapack.so -> lapack/atlas/liblapack.so lrwxrwxrwx 1 root root 27 Jan 23 16:09 /usr/lib/liblapack.so.0 -> lapack/atlas/liblapack.so.0 Just like any good technician, I make a link. # ls -lh /usr/lib/liblap* lrwxrwxrwx 1 root root 24 Jan 23 16:09 /usr/lib/liblapack.a -> lapack/atlas/liblapack.a lrwxrwxrwx 1 root root 25 Jan 23 16:09 /usr/lib/liblapack.so -> lapack/atlas/liblapack.so lrwxrwxrwx 1 root root 27 Jan 23 16:09 /usr/lib/liblapack.so.0 -> lapack/atlas/liblapack.so.0 # ls -lh /usr/lib/lapack/atlas/liblapack.* -rw-r--r-- 1 root root 5.8M Jan 23 16:09 /usr/lib/lapack/atlas/liblapack.a -rw-r--r-- 1 root root 910 Jan 23 16:09 /usr/lib/lapack/atlas/liblapack.la lrwxrwxrwx 1 root root 18 Jan 23 16:09 /usr/lib/lapack/atlas/liblapack.so -> liblapack.so.0.0.0 lrwxrwxrwx 1 root root 18 Jan 23 16:09 /usr/lib/lapack/atlas/liblapack.so.0 -> liblapack.so.0.0.0 -rwxr-xr-x 1 root root 4.2M Jan 23 16:09 /usr/lib/lapack/atlas/liblapack.so.0.0.0 # ln -s /usr/lib/lapack/atlas/liblapack.so.0.0.0 /usr/lib/liblapack.so.3 I just look at the files if everything is there. # ls -lh /usr/lib/liblap* lrwxrwxrwx 1 root root 24 Jan 23 16:09 /usr/lib/liblapack.a -> lapack/atlas/liblapack.a lrwxrwxrwx 1 root root 25 Jan 23 16:09 /usr/lib/liblapack.so -> lapack/atlas/liblapack.so lrwxrwxrwx 1 root root 27 Jan 23 16:09 /usr/lib/liblapack.so.0 -> lapack/atlas/liblapack.so.0 lrwxrwxrwx 1 root root 36 Jan 25 10:10 /usr/lib/liblapack.so.3 -> /usr/lib/lapack/atlas/liblapack.so.0.0.0 Starting the program again, I get this: $ ./smartpca ./smartpca: error while loading shared libraries: liblapack.so.3: cannot open shared object file: No such file or directory Why is it saying that the file is not there even if it is? Is there something wrong in my methodology? Thanks. Alexandre Racine 514-461-1300 poste 3304 [EMAIL PROTECTED]
