I've noticed two odd issues with emerge clean.  First is
that for some packages it wants to protect an old version
while selecting a newer.  Allowing this to go removes the
new one, which overwrote many of the old files, leaving the
package useless.  Second issue is that it sometimes, when
removing an old version, removes files that had been updates
with the install of a new version.  Re-emerging fixes the
problem, obviously.

I'm trying to be careful, I have an old version of GCC
installed, and I'd like to clean it, but I don't want to
risk removing the new files.  Is there any way to see,
exactly, what files will be removed?  Is this a known issue,
and is there anything I can do to repair the database?

/jgt

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