Dear David So as far I see the error from the linker is ld: library not found for -lsmumps_seq
you can try to add the path of the mumps library manually to the configure command. E.g. on some Linux distribution I use ./configure CXXFLAGS=-g -I/..some...path.../MUMPS_5.0.2/include LDFLAGS=-L/ ..some...path.../MUMPS_5.0.2/lib -L/..some...path.../scotch_6.0.4/lib LIBS="-lmumps_common -lpord -lmpiseq -lmetis -lesmumps -lscotch -lscotcherr -lgfortran -lpthread" --prefix=/...installation...path --enable-boost --enable-shared --with-optimization=-O2 --with-pic --enable-python --enable-metis --disable-matlab --disable-superlu --enable-mumps --with-mumps="smumps dmumps cmumps zmumps" you can adapt this to your case. Best regards Kostas On Mon, Jan 23, 2017 at 10:22 AM, David Danan <[email protected]> wrote: > Dear Yves, Dear Kostas, > > sure, please find enclosed the config.log corresponding to the error. > > Thanks in advance for your help, > best regards, > David > > > -----E-mail d'origine----- > De : Konstantinos Poulios <[email protected]> > A: David Danan <[email protected]> > Cc: getfem-users <[email protected]>; Yves Renard < > [email protected]> > Envoyé le : Lu, 23 Jan 2017 9:06 > > Sujet : Re: [Getfem-users] Error with the python interface > > Dear David > > Could you please send us your config.log file after you get the errors > with "checking for library containing smumps_c... no"? > > Best regards > Kostas > > On Mon, Jan 23, 2017 at 9:02 AM, Yves Renard <[email protected]> > wrote: > >> >> Dear David, >> >> The detection of the configure file is probably wrong (the search of smumps_c >> ...) may be the names have to be adapted in configure.ac for Mac ... >> Unfortunately, I have no Mac to test it. >> >> Yves. >> >> >> Le 23/01/2017 à 00:27, David Danan a écrit : >> >> Dear Yves, >> >> i checked, unfortunately i had installed the sequential version...The >> issue lies somewhere else. >> >> I went back to the square one just to be sure and it seems that, even >> though mumps is found with the ./configure, i obtained the following result >> >> [...] >> checking for library containing smumps_c... no >> checking for library containing dmumps_c... no >> checking for library containing cmumps_c... no >> checking for library containing zmumps_c... no >> checking smumps_c.h usability... yes >> checking smumps_c.h presence... yes >> checking for smumps_c.h... yes >> checking dmumps_c.h usability... yes >> checking dmumps_c.h presence... yes >> checking for dmumps_c.h... yes >> checking cmumps_c.h usability... yes >> checking cmumps_c.h presence... yes >> checking for cmumps_c.h... yes >> checking zmumps_c.h usability... yes >> checking zmumps_c.h presence... yes >> checking for zmumps_c.h... yes >> [...] >> >> Quite strange. Do you have any idea that may explain this behavior? >> >> Thanks in advance, >> David. >> >> >> >> -----E-mail d'origine----- >> De : Yves Renard <[email protected]> <[email protected]> >> A: David Danan <[email protected]> <[email protected]> >> Cc: getfem-users <[email protected]> <[email protected]> >> Envoyé le : Sa, 21 Jan 2017 17:00 >> Sujet : Re: [Getfem-users] Error with the python interface >> >> >> >> Dear David, >> >> libsmumps_seq is the sequential Mumps library. May be you installed the >> parallel one (libsmumps). Please check. >> >> Yves. >> >> ----- Original Message ----- >> From: "David Danan" <[email protected]> >> To: "getfem-users" <[email protected]> >> Sent: Saturday, January 21, 2017 3:48:56 PM >> Subject: Re: [Getfem-users] Error with the python interface >> >> Dear Getfem users, >> >> beside the interface problem, i noticed that there is another issue. When >> i compile the test case elastostatic.cc, for instance, i get the following >> error message >> >> ld: library not found for -lsmumps_seq >> >> And since i am on Mac, i didn't find how to obtain the missing library >> (as recommended on the Getfem download page, i used brew to download mumps >> but that's it). Is there anyone who had a similar problem on Mac? >> >> Thank you in advance, >> David. >> >> -----E-mail d'origine----- >> De : David Danan <[email protected]> >> A: getfem-users <[email protected]> >> Envoyé le : Ma, 17 Jan 2017 17:44 >> Sujet : Error with the python interface >> >> Dear Getfem users, >> >> I have just installed Getfem on a mac but i have trouble with the python >> interface. >> The compilation process occur ed without major issue, but when importing >> python in a demo example , I get the following error >> >> Traceback (most recent call last): >> File "demo_laplacian.py", line 30, in <module> >> import getfem as gf >> File "/usr/local/lib/python2.7/site-packages/getfem/__init__.py", line >> 16, in <module> >> from getfem import * >> File "/usr/local/lib/python2.7/site-packages/getfem/getfem.py", line 44, >> in <module> >> from _getfem import * >> ImportError: dlopen(/usr/local/lib/python2.7/site-packages/getfem/_getfem.so, >> 2): Symbol not found: __ZNSt12bad_weak_ptrD1Ev >> Referenced from: /usr/local/lib/python2.7/site-packages/getfem/_getfem.so >> >> Expected in: flat namespace >> in /usr/local/lib/python2.7/site-packages/getfem/_getfem.so >> >> I had this issue with the options "-enable-python=yes --with-pic" for >> configure. >> >> Do you have any clue about the cause of the problem ? >> >> Thank you in advance, >> David. >> >> _______________________________________________ >> Getfem-users mailing list >> [email protected] >> https://mail.gna.org/listinfo/getfem-users >> >> >> >> -- >> >> Yves Renard ([email protected]) tel : (33) 04.72.43.87.08 >> Pole de Mathematiques, INSA-Lyon fax : (33) 04.72.43.85.29 >> 20, rue Albert Einstein >> 69621 Villeurbanne Cedex, FRANCE >> http://math.univ-lyon1.fr/~renard >> >> --------- >> >> >> _______________________________________________ >> Getfem-users mailing list >> [email protected] >> https://mail.gna.org/listinfo/getfem-users >> >> >
_______________________________________________ Getfem-users mailing list [email protected] https://mail.gna.org/listinfo/getfem-users
