Hi,
occasionally (maybe one time in four), my giraph run fails because of the below
RuntimeException.
According to code, it should never happen:
if (msgMap == null) { // should never happen after constructor
throw new RuntimeException(
"sendMessage: msgMap did not exist for " + addr +
" for vertex " + destVertex);
}
This happens during superstep 1 (second superstep). My application actually
*adds* edges on superstep 1
(to make every out-edge also an in-edge of the destination), but since I am
running only on 3 workers,
I am surprised if every worker would not had been registered in the RPC layer
initially.
One hypothesis is that Hadoop does something funny, because one of my server
was under heavy
load. Maybe Hadoop launched another worker to replace a slow worker? Can it
happen?
java.lang.RuntimeException: sendMessage: msgMap did not exist for
[hostname].ml.cmu.edu:30003 for vertex 875713
at
org.apache.giraph.comm.BasicRPCCommunications.sendMessageReq(BasicRPCCommunications.java:825)
at org.apache.giraph.graph.BasicVertex.sendMsg(BasicVertex.java:179)
at edu.cmu.selectlab.BP.BinaryBPVertex.compute(BinaryBPVertex.java:94)
at org.apache.giraph.graph.GraphMapper.map(GraphMapper.java:624)
at org.apache.hadoop.mapreduce.Mapper.run(Mapper.java:144)
at org.apache.hadoop.mapred.MapTask.runNewMapper(MapTask.java:763)
at org.apache.hadoop.mapred.MapTask.run(MapTask.java:369)
at org.apache.hadoop.mapred.Child$4.run(Child.java:259)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:396)
at
org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1059)
at org.apache.hadoop.mapred.Child.main(Child.java:253)
Aapo Kyrola
Ph.D. student, http://www.cs.cmu.edu/~akyrola
