What's the best practice for "derived files" in a git repo?

By derived files I mean .min.js and coffee *.js files concatenated into the 
project .js file, and the docs created out of the source files (docco, 
jsdoc, ..).

I ask because its been suggested to minimize these, and put them in a 
"deployment" repo like a gh-pages branch.  Even the project's ultimate .js 
file!  Now *that*s DRY!  :)

But seriously, anyone thinking about this? Simple approach?  Thanks.

   -- Owen

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