On 2020-10-25, at 6:05 AM, Anca Jain <ancaj...@gmail.com> wrote:

> Hi! I am a beginner to Git. I opened a folder located on my Desktop with “Git 
> Bash Here”. I run “git add.” without entering “git init” first. Now almost 
> all of my computer files (the ones on the Desktop) are in the “Untracked 
> files” folder.
> 
>...
>
> I need a command to make Git let my Desktop files alone. I don’t want to 
> commit my whole computer in Git, I just want to get to “working tree clean” 
> without deleting all of my documents. The suggestions I found on the internet 
> require a risk of being left with nothing on my computer.

So just as a first comment, it's not your whole computer that's in Git. Your 
desktop is just another folder in Microsoft Windows. I think (it's been years 
since I've trusted Microsoft-Brand graphical windowing operating system) that 
it's in HOME_DIRECTORY/Desktop on modern versions (again, has moved over the 
years) -- so typically C:\Profiles\Yourname\Desktop, I think.

"dir" on windows has support for hidden files, that are not displayed by 
default. If you have a special git bash shell, you probably have a full set of 
unix-like commands.

So, send us a copy of the output from:

ls -asF

and we can help figure out what happened.
(That's like asking "dir" to include hidden files, but I don't remember the 
option to dir to do that.)

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