> ...but the error persisted...

What error?

To be clear, syntax highlighting of code blocks is **NOT** part of "standard" 
Markdown. If you get it added to the [CommonMark 
specification](https://spec.commonmark.org/), that is, by working with the 
[CommonMark group](http://commonmark.org/) and convincing them to make it a 
standard feature, once it's in the standard and implemented, it will just work 
in the Geany Markdown plugin. Until then, installing patches or extra packages 
won't help.

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