Re: [I] [R] Package Error: package arrow/libs/arrow.so: undefined symbol: _ZN5arrow7dataset14JsonFileFormatC1Ev [arrow]

[via GitHub]

Extremys commented on issue #40326:
URL: https://github.com/apache/arrow/issues/40326#issuecomment-1976008409

   Sure! There it is :
   
   ```R
   R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
   Copyright (C) 2024 The R Foundation for Statistical Computing
   Platform: x86_64-pc-linux-gnu (64-bit)
   
   R is free software and comes with ABSOLUTELY NO WARRANTY.
   You are welcome to redistribute it under certain conditions.
   Type 'license()' or 'licence()' for distribution details.
   
     Natural language support but running in an English locale
   
   R is a collaborative project with many contributors.
   Type 'contributors()' for more information and
   'citation()' on how to cite R or R packages in publications.
   
   Type 'demo()' for some demos, 'help()' for on-line help, or
   'help.start()' for an HTML browser interface to help.
   Type 'q()' to quit R.
   
   [1] "C"
   [Previously saved workspace restored]
   
   > options(repos = c(CRAN_mirror = "https://myrepo.com/prod-cran/latest";))
   > install.packages('arrow')
   Installing package into ‘/home/myuser/R/x86_64-pc-linux-gnu-library/4.3’
   (as ‘lib’ is unspecified)
   trying URL 
'https://myrepo.com/prod-cran/latest/src/contrib/arrow_14.0.2.1.tar.gz'
   Content type 'application/x-gzip' length 4278652 bytes (4.1 MB)
   ==================================================
   downloaded 4.1 MB
   
   [1] "C"
   * installing *source* package ‘arrow’ ...
   ** package ‘arrow’ successfully unpacked and MD5 sums checked
   ** using staged installation
   *** pkg-config found.
   *** Trying Arrow C++ found by pkg-config: 
/home/easybuild/software/Arrow/14.0.1-gfbf-2022b
   [1] "C"
   **** C++ library version 14.0.1 is supported by R version 14.0.2.1
   PKG_CFLAGS=-DUTF8PROC_EXPORTS 
-I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON
   PKG_LIBS=-L/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/lib   
-larrow_dataset -lparquet -larrow_acero -larrow
   ** libs
   using C++ compiler: ‘g++ (GCC) 12.2.0’
   using C++17
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
-I/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c RTasks.cpp -o 
RTasks.o
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
-I/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c altrep.cpp -o 
altrep.o
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
-I/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c array.cpp -o 
array.o
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
-I/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c 
array_to_vector.cpp -o array_to_vector.o
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
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-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
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arraydata.o
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-I/usr/local/include 
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-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
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-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
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-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
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-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
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-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
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-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
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-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
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-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
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 GCCcore-12.2.0/include 
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 DBC/2.3.11-foss-2022b/include 
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-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
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-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
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-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
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-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
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-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
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-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
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-I/usr/local/include 
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-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
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-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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memorypool.o
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-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
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-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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 GCCcore-12.2.0/include 
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 DBC/2.3.11-foss-2022b/include 
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-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
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-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
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-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
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-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
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-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
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-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
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-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c recordbatch.cpp 
-o recordbatch.o
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
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-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
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-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
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-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
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-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
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-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c 
recordbatchreader.cpp -o recordbatchreader.o
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-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
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-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
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-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
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-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
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-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
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-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c 
recordbatchwriter.cpp -o recordbatchwriter.o
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-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
-I/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
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-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c 
safe-call-into-r-impl.cpp -o safe-call-into-r-impl.o
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-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
-DUTF8PROC_EXPORTS -I/home/easybuild/software/Arrow/14.0.1-gfbf-2022b/include 
-I/home/easybuild/software/utf8proc/2.8.0-GCCcore-12.2.0/include 
-I/usr/local/include 
-I/home/easybuild/software/lz4/1.9.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include     
-DARROW_R_WITH_PARQUET -DARROW_R_WITH_DATASET -DARROW_R_WITH_ACERO 
-DARROW_R_WITH_JSON 
-I'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/cpp11/include' 
-I/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/include 
-I/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/GDAL/3.6.2-foss-2022b/include 
-I/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Ima
 geMagick/7.1.0-53-GCCcore-12.2.0/include 
-I/home/easybuild/software/GSL/2.7-GCC-12.2.0/include 
-I/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/include 
-I/home/easybuild/software/HDF5/1.14.0-gompi-2022b/include 
-I/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/include 
-I/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/Java/11.0.20/include 
-I/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/include 
-I/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/include 
-I/home/easybuild/software/PCRE2/10.40-
 GCCcore-12.2.0/include 
-I/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/include 
-I/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/include 
-I/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c scalar.cpp -o 
scalar.o
   g++ -std=gnu++17 
-I"/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/include" -DNDEBUG 
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-I/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/include 
-I/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/include 
-I/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/include 
-I/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/include 
-I/home/easybuild/software/JAGS/4.3.2-foss-2022b/include 
-I/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/include 
-I/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/include 
-I/home/easybuild/software/unixO
 DBC/2.3.11-foss-2022b/include 
-I/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/include 
-I/home/easybuild/software/X11/20221110-GCCcore-12.2.0/include 
-I/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/include 
-I/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include 
-I/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas    
-fpic  -O2 -ftree-vectorize -march=native -fno-math-errno  -c type_infer.cpp -o 
type_infer.o
   g++ -std=gnu++17 -shared 
-L/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/lib 
-L/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/OpenSSL/1.1.1q-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libgit2/1.5.0-GCCcore-12.2.0/lib 
-L/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/MPFR/4.2.0-GCCcore-12.2.0/lib 
-L/home/easybuild/software/GDAL/3.6.2-foss-2022b/lib64 
-L/home/easybuild/software/GDAL/3.6.2-foss-2022b/lib 
-L/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/nodejs/18.12.1-GCCcore-12.2.0/lib 
-L/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/GLPK/5.0-GCCcore-12.2.0/lib 
-L/home/easybuild/software/ImageMagick/7.1.0-53-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/ImageMagick/7.1.0-53-GCCcore-12.2.0/lib 
-L/home/easybuild/software/GSL/2.7-GCC-12.2.0/lib64 -L/home/easybuild/
 software/GSL/2.7-GCC-12.2.0/lib 
-L/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/UDUNITS/2.2.28-GCCcore-12.2.0/lib 
-L/home/easybuild/software/HDF5/1.14.0-gompi-2022b/lib64 
-L/home/easybuild/software/HDF5/1.14.0-gompi-2022b/lib 
-L/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/ICU/72.1-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libsndfile/1.2.0-GCCcore-12.2.0/lib 
-L/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/lib64 
-L/home/easybuild/software/FFTW/3.3.10-GCC-12.2.0/lib 
-L/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/NLopt/2.7.1-GCCcore-12.2.0/lib 
-L/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/GMP/6.2.1-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libxml2/2.10.3-GCCcore-12.2.0/lib 
-L/home/easybuild/softw
 are/cURL/7.86.0-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/cURL/7.86.0-GCCcore-12.2.0/lib 
-L/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/Tk/8.6.12-GCCcore-12.2.0/lib 
-L/home/easybuild/software/Java/11.0.20/lib64 
-L/home/easybuild/software/Java/11.0.20/lib 
-L/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/LibTIFF/4.4.0-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libpng/1.6.38-GCCcore-12.2.0/lib 
-L/home/easybuild/software/PCRE2/10.40-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/PCRE2/10.40-GCCcore-12.2.0/lib 
-L/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/SQLite/3.39.4-GCCcore-12.2.0/lib 
-L/home/easybuild/software/zlib/1.2.12-GCCcore-12.2.0/lib64 -L/home/easybuild/so
 ftware/zlib/1.2.12-GCCcore-12.2.0/lib 
-L/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/XZ/5.2.7-GCCcore-12.2.0/lib 
-L/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/bzip2/1.0.8-GCCcore-12.2.0/lib 
-L/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/ncurses/6.3-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libreadline/8.2-GCCcore-12.2.0/lib 
-L/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/cairo/1.17.4-GCCcore-12.2.0/lib 
-L/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libGLU/9.0.2-GCCcore-12.2.0/lib 
-L/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/Mesa/22.2.4-GCCcore-12.2.0/lib 
-L/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/lib64 
-L/home/easybuild/software/Arrow/11.0.0-gfbf-2022b/lib -L/home/easybui
 ld/software/HarfBuzz/5.3.1-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/HarfBuzz/5.3.1-GCCcore-12.2.0/lib 
-L/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/PostgreSQL/15.2-GCCcore-12.2.0/lib 
-L/home/easybuild/software/JAGS/4.3.2-foss-2022b/lib64 
-L/home/easybuild/software/JAGS/4.3.2-foss-2022b/lib 
-L/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/libsodium/1.0.18-GCCcore-12.2.0/lib 
-L/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/FriBidi/1.0.12-GCCcore-12.2.0/lib 
-L/home/easybuild/software/unixODBC/2.3.11-foss-2022b/lib64 
-L/home/easybuild/software/unixODBC/2.3.11-foss-2022b/lib 
-L/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/lib64 
-L/home/easybuild/software/wkhtmltopdf/0.12.3-foss-2022b/lib 
-L/home/easybuild/software/X11/20221110-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/X11/20221110-GCCcore-12.2.0/lib 
-L/home/easybuild/software/Xvfb/21.1.6-G
 CCcore-12.2.0/lib64 -L/home/easybuild/software/Xvfb/21.1.6-GCCcore-12.2.0/lib 
-L/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/lib64 
-L/home/easybuild/software/pkgconf/1.9.3-GCCcore-12.2.0/lib 
-L/home/easybuild/software/ScaLAPACK/2.2.0-gompi-2022b-fb/lib64 
-L/home/easybuild/software/ScaLAPACK/2.2.0-gompi-2022b-fb/lib 
-L/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 
-L/home/easybuild/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib 
-L/home/easybuild/software/GCCcore/12.2.0/lib64 
-L/home/easybuild/software/GCCcore/12.2.0/lib -o arrow.so RTasks.o altrep.o 
array.o array_to_vector.o arraydata.o arrowExports.o bridge.o buffer.o 
chunkedarray.o compression.o compute-exec.o compute.o config.o csv.o dataset.o 
datatype.o expression.o extension-impl.o feather.o field.o filesystem.o io.o 
json.o memorypool.o message.o parquet.o r_to_arrow.o recordbatch.o 
recordbatchreader.o recordbatchwriter.o safe-call-into-r-impl.o scalar.o 
schema.o symbols.o table.o threadpool.o type_infer.o -L/home/e
 asybuild/software/Arrow/14.0.1-gfbf-2022b/lib -larrow_dataset -lparquet 
-larrow_acero -larrow -L/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/lib 
-lR
   installing to 
/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/00LOCK-arrow/00new/arrow/libs
   ** R
   ** inst
   ** byte-compile and prepare package for lazy loading
   [1] "C"
   ** help
   *** installing help indices
   ** building package indices
   [1] "C"
   ** testing if installed package can be loaded from temporary location
   libgcc_s.so.1 must be installed for pthread_cancel to work
   sh: line 1:  8423 Aborted                 R_TESTS= 
'/home/easybuild/software/R/4.3.3-foss-2022b/lib64/R/bin/R' --no-save 
--no-restore --no-echo 2>&1 < '/tmp/RtmpDfUEVQ/file17ad435812d2'
   [1] "C"
   Error: package or namespace load failed for ‘arrow’ in dyn.load(file, 
DLLpath = DLLpath, ...):
    unable to load shared object 
'/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/00LOCK-arrow/00new/arrow/libs/arrow.so':
     
/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/00LOCK-arrow/00new/arrow/libs/arrow.so:
 undefined symbol: _ZN5arrow7dataset14JsonFileFormatC1Ev
   Error: loading failed
   Execution halted
   ERROR: loading failed
   * removing ‘/home/myuser/R/x86_64-pc-linux-gnu-library/4.3/arrow’
   
   The downloaded source packages are in
           ‘/tmp/RtmpvY7CC8/downloaded_packages’
   Warning message:
   In install.packages("arrow") :
     installation of package ‘arrow’ had non-zero exit status
   ```


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