jonkeane commented on a change in pull request #9898: URL: https://github.com/apache/arrow/pull/9898#discussion_r613623146
########## File path: r/vignettes/developing.Rmd ########## @@ -0,0 +1,510 @@ +--- +title: "Arrow R Developer Guide" +output: rmarkdown::html_vignette +vignette: > + %\VignetteIndexEntry{Arrow R Developer Guide} + %\VignetteEngine{knitr::rmarkdown} + %\VignetteEncoding{UTF-8} +--- + +```{r setup options, include=FALSE} +knitr::opts_chunk$set(error = TRUE, eval = FALSE) + +# Get environment variables describing what to evaluate +run <- tolower(Sys.getenv("RUN_DEVDOCS", "false")) == "true" +macos <- tolower(Sys.getenv("DEVDOCS_MACOS", "false")) == "true" +ubuntu <- tolower(Sys.getenv("DEVDOCS_UBUNTU", "false")) == "true" +sys_install <- tolower(Sys.getenv("DEVDOCS_SYSTEM_INSTALL", "false")) == "true" + +# Update the source knit_hook to save the chunk (if it is marked to be saved) +knit_hooks_source <- knitr::knit_hooks$get("source") +knitr::knit_hooks$set(source = function(x, options) { + # Extra paranoia about when this will write the chunks to the script, we will + # only save when: + # * CI is true + # * RUN_DEVDOCS is true + # * options$save is TRUE (and a check that not NULL won't crash it) + if (as.logical(Sys.getenv("CI", FALSE)) && run && !is.null(options$save) && options$save) + cat(x, file = "script.sh", append = TRUE, sep = "\n") + # but hide the blocks we want hidden: + if (!is.null(options$hide) && options$hide) { + return(NULL) + } + knit_hooks_source(x, options) +}) +``` + +```{bash, save=run, hide=TRUE} +# Stop on failure, echo input as we go +set -e +set -x +``` + +If you're looking to contribute to `arrow`, this document can help you set up a development environment that will enable you to write code and run tests locally. It outlines how to build the various components that make up the Arrow project and R package, as well as some common troubleshooting and workflows developers use. Many contributions can be accomplished with the instructions in [R-only development](#r-only-development). But if you're working on both the C++ library and the R package, the [Developer environment setup](#-developer-environment-setup) section will guide you through setting up a developer environment. + +This document is intended only for developers of Apache Arrow or the Arrow R package. Users of the package in R do not need to do any of this setup. If you're looking for how to install Arrow, see [the instructions in the readme](https://arrow.apache.org/docs/r/#installation); Linux users can find more details on building from source at `vignette("install", package = "arrow")`. + +This document is a work in progress and will grow + change as the Apache Arrow project grows and changes. We have tried to make these steps as robust as possible (in fact, we even test exactly these instructions on our nightly CI to ensure they don't become stale!), but certain custom configurations might conflict with these instructions and there are differences of opinion across developers about if and what the one true way to set up development environments like this is. We also solicit any feedback you have about things that are confusing or additions you would like to see here. Please [report an issue](https://issues.apache.org/jira/projects/ARROW/issues) if there you see anything that is confusing, odd, or just plain wrong. + +## R-only development + +Windows and macOS users who wish to contribute to the R package and +don’t need to alter the Arrow C++ library may be able to obtain a +recent version of the library without building from source. On macOS, +you may install the C++ library using [Homebrew](https://brew.sh/): + +``` shell +# For the released version: +brew install apache-arrow +# Or for a development version, you can try: +brew install apache-arrow --HEAD +``` + +On Windows and Linux, you can download a .zip file with the arrow dependencies from the +nightly repository, +and then set the `RWINLIB_LOCAL` environment variable to point to that +zip file before installing the `arrow` R package. Version numbers in that +repository correspond to dates, and you will likely want the most recent. + +To see what nightlies are available, you can use Arrow's (or any other S3 client's) S3 listing functionality to see what is in the bucket `s3://arrow-r-nightly/libarrow/bin`: + +``` +nightly <- s3_bucket("arrow-r-nightly") +nightly$ls("libarrow/bin") +``` + +## Developer environment setup + +If you need to alter both the Arrow C++ library and the R package code, or if you can’t get a binary version of the latest C++ library elsewhere, you’ll need to build it from source too. This section discusses how to set up a C++ build configured to work with the R package. For more general resources, see the [Arrow C++ developer +guide](https://arrow.apache.org/docs/developers/cpp/building.html). + +### Install dependencies {.tabset} + +The Arrow C++ library will by default use system dependencies if suitable versions are found; if they are not present, it will build them during its own build process. The only dependencies that one needs to install outside of the build process are `cmake` (for configuring the build) and `openssl` if you are building with S3 support. + +For a faster build, you may choose to install on the system more C++ library dependencies (such as `lz4`, `zstd`, etc.) so that they don't need to be built from source in the Arrow build. This is optional. + +#### macOS +```{bash, save=run & macos} +brew install cmake openssl +``` + +#### Ubuntu +```{bash, save=run & ubuntu} +sudo apt install -y cmake libcurl4-openssl-dev libssl-dev +``` + +### Configure the Arrow build {.tabset} + +You can choose to build and then install the Arrow library into a user-defined directory or into a system-level directory. You only need to do one of these two options. + +Either way, you will need to create a directory into which the C++ build will put its contents. It is recommended to make a `build` directory inside of the `cpp` directory of the Arrow git repository (it is git-ignored, so you won't accidentally check it in). + +Starting from the directory that contains your git checkout of `apache/arrow`, + +```{bash, save=run} +mkdir -p arrow/cpp/build +``` + +#### Install to another directory + +It is recommended that you install the arrow library to a user-level directory to be used in development. In this example we will install it to a directory called `dist` that has the same parent as our `arrow` checkout, but it could be named or located anywhere you would like. However, note that your installation of the Arrow R package will point to this directory and need it to remain intact for the package to continue to work. This is one reason we recommend *not* placing it inside of the arrow git checkout. + +```{bash, save=run & !sys_install} +export ARROW_HOME=$(pwd)/dist +mkdir $ARROW_HOME +``` + +_Special instructions on Linux:_ You will need to set `LD_LIBRARY_PATH` to the `lib` directory that will is under where we set `$ARROW_HOME`, before launching R and using Arrow. One way to do this is to add it to your profile (we use `~/.bash_profile` here, but you might need to put this in a different file depending on your setup). On macOS we do not need to do this because the macOS shared library paths are hardcoded to their locations during build time. + +```{bash, save=run & ubuntu & !sys_install} +export LD_LIBRARY_PATH=$ARROW_HOME/lib:$LD_LIBRARY_PATH +echo "export LD_LIBRARY_PATH=$ARROW_HOME/lib:$LD_LIBRARY_PATH" >> ~/.bash_profile +``` + +Now we can move into the arrow repository to start the build process. To build, change directories to be inside `arrow/cpp/build` (we do this in two steps so that we can use `popd` later to return to the `arrow` directory): + +```{bash, save=run & !sys_install} +pushd arrow +pushd cpp/build +``` + +You’ll first call `cmake` to configure the build and then `make install`. For the R package, you’ll need to enable several features in the C++ library using `-D` flags: + +```{bash, save=run & !sys_install} +cmake \ + -DCMAKE_INSTALL_PREFIX=$ARROW_HOME \ + -DCMAKE_INSTALL_LIBDIR=lib \ + -DARROW_COMPUTE=ON \ + -DARROW_CSV=ON \ + -DARROW_DATASET=ON \ + -DARROW_FILESYSTEM=ON \ + -DARROW_JEMALLOC=ON \ + -DARROW_JSON=ON \ + -DARROW_PARQUET=ON \ + -DARROW_WITH_SNAPPY=ON \ + -DARROW_WITH_ZLIB=ON \ + -DARROW_INSTALL_NAME_RPATH=OFF \ + .. +``` + +`..` refers to the C++ source directory: we're in `cpp/build`, and the source is in `cpp`. + +#### Install to the system + +If you would like to install Arrow as a system library you can do that as well. This is in some respects simpler, but if you already have Arrow libraries installed there, it would disrupt them and possibly require `sudo` permissions. + +Now we can move into the arrow repository to start the build process. To build, change directories to be inside `arrow/cpp/build` (we do this in two steps so that we can use `popd` later to return to the `arrow` directory): + +```{bash, save=run & sys_install} +pushd arrow +pushd cpp/build +``` + +You’ll first call `cmake` to configure the build and then `make install`. For the R package, you’ll need to enable several features in the C++ library using `-D` flags: + +```{bash, save=run & sys_install} +cmake \ + -DARROW_COMPUTE=ON \ + -DARROW_CSV=ON \ + -DARROW_DATASET=ON \ + -DARROW_FILESYSTEM=ON \ + -DARROW_JEMALLOC=ON \ + -DARROW_JSON=ON \ + -DARROW_PARQUET=ON \ + -DARROW_WITH_SNAPPY=ON \ + -DARROW_WITH_ZLIB=ON \ + -DARROW_INSTALL_NAME_RPATH=OFF \ + .. +``` + +`..` refers to the C++ source directory: we're in `cpp/build`, and the source is in `cpp`. + +### More Arrow features + +To enable optional features including: S3 support, an alternative memory allocator, and additional compression libraries, add some or all of these flags (the trailing `\` makes them easier to paste into a bash shell on a new line): + +``` shell + -DARROW_MIMALLOC=ON \ + -DARROW_WITH_BROTLI=ON \ + -DARROW_WITH_BZ2=ON \ + -DARROW_WITH_LZ4=ON \ + -DARROW_WITH_SNAPPY=ON \ + -DARROW_WITH_ZSTD=ON \ +``` + +Other flags that may be useful: + +* `-DARROW_EXTRA_ERROR_CONTEXT=ON` makes errors coming from the C++ library point to files and line numbers Review comment: I've not actually used it, I can add it to the list if you think it's helpful -- This is an automated message from the Apache Git Service. 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