msbukal opened a new pull request #15925:
URL: https://github.com/apache/beam/pull/15925
FhirIO is almost 2000 lines long. This change breaks up the file into
logical groupings:
* FhirIOSearch -> Move FhirIO.Search into this, and move the
FhirSearchParameters in
* FhirIORead -> Move FhirIO.Read here
* FhirIOWrite -> Move FhirIO.Write, FhirIO.Import and FhirIO.ExecuteBundles
into here. Additionally make ExecuteBundles implement FhirIOWrite, cleaning up
some excess code.
Also renamed all occurrences of FHIR messages -> FHIR resources & fixed some
incorrect references to Hl7v2 in comments. Messages are an Hl7v2 concept, and
are different from resources. (In Hl7v2, messages are stateless. FHIR resources
are stateful).
------------------------
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`ValidatesRunner` compliance status (on master branch)
--------------------------------------------------------
<table>
<thead>
<tr>
<th>Lang</th>
<th>ULR</th>
<th>Dataflow</th>
<th>Flink</th>
<th>Samza</th>
<th>Spark</th>
<th>Twister2</th>
</tr>
</thead>
<tbody>
<tr>
<td>Go</td>
<td>---</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/badge/icon";>
</a>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Flink/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Samza/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Samza/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Go_VR_Spark/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>---</td>
</tr>
<tr>
<td>Java</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_ULR/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_ULR/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow/lastCompletedBuild/badge/icon?subject=V1";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Streaming/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Streaming/lastCompletedBuild/badge/icon?subject=V1+Streaming";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Dataflow_Java11/lastCompletedBuild/badge/icon?subject=V1+Java+11";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2/lastCompletedBuild/badge/icon?subject=V2";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2_Streaming/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_VR_Dataflow_V2_Streaming/lastCompletedBuild/badge/icon?subject=V2+Streaming";>
</a><br>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink/lastCompletedBuild/badge/icon?subject=Java+8";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink_Java11/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Flink_Java11/lastCompletedBuild/badge/icon?subject=Java+11";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Batch/lastCompletedBuild/badge/icon?subject=Portable";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Flink_Streaming/lastCompletedBuild/badge/icon?subject=Portable+Streaming";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Samza/lastCompletedBuild/badge/icon";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Samza/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Samza/lastCompletedBuild/badge/icon?subject=Portable";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Spark/lastCompletedBuild/badge/icon";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_PVR_Spark_Batch/lastCompletedBuild/badge/icon?subject=Portable";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_SparkStructuredStreaming/lastCompletedBuild/badge/icon?subject=Structured+Streaming";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Twister2/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_ValidatesRunner_Twister2/lastCompletedBuild/badge/icon";>
</a>
</td>
</tr>
<tr>
<td>Python</td>
<td>---</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow/lastCompletedBuild/badge/icon?subject=V1";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Py_VR_Dataflow_V2/lastCompletedBuild/badge/icon?subject=V2";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Py_ValCont/lastCompletedBuild/badge/icon?subject=ValCont";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Python_PVR_Flink_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Python_PVR_Flink_Cron/lastCompletedBuild/badge/icon?subject=Portable";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Flink/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Flink/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Samza/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Samza/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Python_VR_Spark/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>---</td>
</tr>
<tr>
<td>XLang</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Direct/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Direct/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Dataflow/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Dataflow/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Flink/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Samza/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Samza/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_XVR_Spark/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>---</td>
</tr>
</tbody>
</table>
Examples testing status on various runners
--------------------------------------------------------
<table>
<thead>
<tr>
<th>Lang</th>
<th>ULR</th>
<th>Dataflow</th>
<th>Flink</th>
<th>Samza</th>
<th>Spark</th>
<th>Twister2</th>
</tr>
</thead>
<tbody>
<tr>
<td>Go</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
<tr>
<td>Java</td>
<td>---</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Cron/lastCompletedBuild/badge/icon?subject=V1";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Java11_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Java_Examples_Dataflow_Java11_Cron/lastCompletedBuild/badge/icon?subject=V1+Java11";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java_Examples_Dataflow_V2/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java_Examples_Dataflow_V2/lastCompletedBuild/badge/icon?subject=V2";>
</a><br>
</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
<tr>
<td>Python</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
<tr>
<td>XLang</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
</tbody>
</table>
Post-Commit SDK/Transform Integration Tests Status (on master branch)
------------------------------------------------------------------------------------------------
<table>
<thead>
<tr>
<th>Go</th>
<th>Java</th>
<th>Python</th>
</tr>
</thead>
<tbody>
<tr>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Go/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Java/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Python36/lastCompletedBuild/badge/icon?subject=3.6";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Python37/lastCompletedBuild/badge/icon?subject=3.7";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PostCommit_Python38/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PostCommit_Python38/lastCompletedBuild/badge/icon?subject=3.8";>
</a>
</td>
</tr>
</tbody>
</table>
Pre-Commit Tests Status (on master branch)
------------------------------------------------------------------------------------------------
<table>
<thead>
<tr>
<th>---</th>
<th>Java</th>
<th>Python</th>
<th>Go</th>
<th>Website</th>
<th>Whitespace</th>
<th>Typescript</th>
</tr>
</thead>
<tbody>
<tr>
<td>Non-portable</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Java_Cron/lastCompletedBuild/badge/icon";>
</a><br>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Python_Cron/lastCompletedBuild/badge/icon?subject=Tests";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_PythonLint_Cron/lastCompletedBuild/badge/icon?subject=Lint";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocker_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocker_Cron/badge/icon?subject=Docker";>
</a><br>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocs_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_PythonDocs_Cron/badge/icon?subject=Docs";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Go_Cron/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Website_Cron/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Whitespace_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Whitespace_Cron/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Typescript_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Typescript_Cron/lastCompletedBuild/badge/icon";>
</a>
</td>
</tr>
<tr>
<td>Portable</td>
<td>---</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_Portable_Python_Cron/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>
<a
href="https://ci-beam.apache.org/job/beam_PreCommit_GoPortable_Cron/lastCompletedBuild/";>
<img alt="Build Status"
src="https://ci-beam.apache.org/job/beam_PreCommit_GoPortable_Cron/lastCompletedBuild/badge/icon";>
</a>
</td>
<td>---</td>
<td>---</td>
<td>---</td>
</tr>
</tbody>
</table>
See
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