On 04/05/2010, at 18:37, Christian Höner zu Siederdissen wrote: > * Roman Leshchinskiy <r...@cse.unsw.edu.au> [04.05.2010 10:02]: >> On 04/05/2010, at 11:10, Christian Höner zu Siederdissen wrote: >> >>> Here http://www.tbi.univie.ac.at/newpapers/Abstracts/98-06-009.ps.gz is >>> a description of a parallel version of RNAfold. >> >> IIUC, this parallelises processing of each diagonal but computes the >> diagonals one after another. Could you perhaps store each diagonal as a >> separate (parallel) array? That would make things much simpler. > > That is no problem at all.
Really? So you could have a sequential list/array/whatever of flat parallel arrays, one per diagonal? And construct all elements of each diagonal in parallel? That would make parallelisation quite trivial... Roman _______________________________________________ Glasgow-haskell-users mailing list Glasgow-haskell-users@haskell.org http://www.haskell.org/mailman/listinfo/glasgow-haskell-users
