Hi Scott
I am just looking at gbrowse again after a year or two and thought I would
freshen my instaltion. Should the current 'stable' cvs branch
cvs -d :pserver:[EMAIL PROTECTED]:/cvsroot/gmod co -r stable
Generic-Genome-Browser
be missing these lib files?
comm -23 ./old_libs ./new_libs
./Bio/DB/GFF/Adaptor/ace.pm
./Bio/DB/GFF/Adaptor/berkeleydb.pm
./Bio/DB/GFF/Adaptor/berkeleydb/iterator.pm
./Bio/DB/GFF/Adaptor/biofetch.pm
./Bio/DB/GFF/Adaptor/biofetch_oracle.pm
./Bio/DB/GFF/Adaptor/dbi.pm
./Bio/DB/GFF/Adaptor/dbi/caching_handle.pm
./Bio/DB/GFF/Adaptor/dbi/iterator.pm
./Bio/DB/GFF/Adaptor/dbi/mysql.pm
./Bio/DB/GFF/Adaptor/dbi/mysqlace.pm
./Bio/DB/GFF/Adaptor/dbi/mysqlcmap.pm
./Bio/DB/GFF/Adaptor/dbi/mysqlopt.pm
./Bio/DB/GFF/Adaptor/dbi/oracle.pm
./Bio/DB/GFF/Adaptor/dbi/oracleace.pm
./Bio/DB/GFF/Adaptor/dbi/pg.pm
./Bio/DB/GFF/Adaptor/memory.pm
./Bio/DB/GFF/Adaptor/memory/feature_serializer.pm
./Bio/DB/GFF/Adaptor/memory/iterator.pm
./Bio/DB/GFF/Aggregator.pm
./Bio/DB/GFF/Featname.pm
./Bio/DB/GFF/Feature.pm
./Bio/DB/GFF/Homol.pm
./Bio/DB/GFF/RelSegment.pm
./Bio/DB/GFF/Segment.pm
./Bio/DB/GFF/Typename.pm
./Bio/Graphics/Browser/CAlign.pm
the missing Bio/DB/GFF/Adaptor/ is what concerns me at the moment.
embryonix [Bio/DB/GFF]% ll
total 24
drwxr-sr-x 5 tomc fishadmin 512 Feb 27 14:49 ../
drwxr-sr-x 2 tomc fishadmin 512 Feb 27 14:49 CVS/
drwxr-sr-x 4 tomc fishadmin 512 Feb 27 14:49 ./
drwxr-sr-x 3 tomc fishadmin 512 Feb 27 14:49 Aggregator/
-rw-r--r-- 1 tomc fishadmin 2624 Dec 21 13:52 SyntenyBlock.pm
-rw-r--r-- 1 tomc fishadmin 4413 Dec 21 13:52 SyntenyIO.pm
--
... nice weather eh [EMAIL PROTECTED]
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